Altererythrobacter sp. N1: LBX01_11510
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Entry
LBX01_11510 CDS
T10199
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
altn Altererythrobacter sp. N1
Pathway
altn00550
Peptidoglycan biosynthesis
altn01100
Metabolic pathways
altn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
altn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LBX01_11510 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LBX01_11510 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
altn01011
]
LBX01_11510 (mrdA)
Enzymes [BR:
altn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LBX01_11510 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
altn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LBX01_11510 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UBS32118
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Position
complement(2478208..2480265)
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AA seq
685 aa
AA seq
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MRRKRQRARAIVSPATLSNSFDRRSFVIAGVQGGLGVLLAARMGYLSIFENAKYKTEAES
NRVNLSLIPPRRGWILDRNGVPLASNRADFRVDVIPDRMRDAEAEIGELATLLSLDKVKV
DEILDKVEKSRGFAPVEIASGLDYDQFAAVSVRLPDLPGVVPQRGFSRFYPTGPSVGHLV
GYVGAPSREEYEREPKPLLLTPGFKVGKDGIEKQFEQELRGMPGARRVEVTATGRRVRDL
ETREDVPGHPVHLTIDGPLQDYAARRIGLESGSVVVIDCLTGDLLCMSSMPSFDPNSFSD
GIGRLEYSMLSKNDRVPLRNKVLQGLYPPGSTVKPMVAMAFLEAGLSPDATVTCNGGLRV
GNRVFHCWNRRGHGSVNMAKGIYQSCDVYFYHFAQQLGMNVISDMARRCGLGQEFPLPVA
SQFYGTVPDPEWKLKKYGREWQAFDTVNATIGQGYMLFNPLQLAVYAARIATGRTVMPRL
ILDGKPSRFGSMNFHGDHVQIIQNAMSDVINGPGTAGRARLPIDDVLMAGKTGTAQVVSL
GISNGKTGPWKYRDHGLFICFAPFNNPRYACAVVIEHGGGSGSAYPIARDVMTFLFDPAK
ALDSLHSFEKQWGGKPAQRMARQYAAFVGEMSIAVPEETFNLDPRESRAAAEARAQPKSD
ATNNGTAKGQTGEEVSSSANPDNAT
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcaagcgccagcgcgcgcgcgcaatcgttagccccgccactctctccaacagc
ttcgaccgtcgaagtttcgtgattgctggcgtgcaaggtggcctaggcgtgctactggcc
gcgcgaatgggctatctctcgatcttcgagaatgcaaaatacaagacggaggcagaaagc
aaccgggtcaacctttcgctgatcccgccgcgccgcggctggattctggatcgtaatggc
gtgcccctcgcctctaaccgtgcggacttccgggttgatgtaatccccgatcggatgcgc
gatgctgaggcagaaattggcgaactcgcaactttgctcagcttagacaaagtcaaagtc
gacgagattctcgacaaagtggaaaagagccgcggtttcgcgccagtcgaaatcgccagc
ggcctcgattacgatcaattcgccgcagtcagcgtccggctgcccgatctgccaggtgtc
gtacctcaacgaggcttttcgcggttttatccgaccgggccatcggtcggtcatctggtt
ggttatgtcggcgcgcccagccgtgaggagtacgaacgcgagcctaaaccgctgctactc
acgcccggtttcaaagtgggtaaggacgggatcgaaaagcagttcgaacaggaactgcgc
ggcatgcccggcgcacggcgggtggaggtcacggcgactggccgcagggtgcgcgacctc
gaaacgcgcgaagatgtgcctggccatcctgtccatctgactatcgacgggccgttgcag
gactatgccgcgcgcaggattggactcgaatccggttcggtggtggtgatcgactgcctg
acaggcgaccttctttgcatgtcctccatgcccagtttcgaccctaacagcttctccgac
gggatcggtcgtctcgaatattcgatgctgagcaaaaacgaccgggtgcccctgcgtaac
aaagtgctgcaagggctctatccaccgggctcgacggtgaagccgatggtcgcgatggct
tttctggaagccgggctgtcccccgatgcgaccgtcacctgcaatggcggcctgcgcgtg
ggcaaccgtgtgttccactgctggaaccggcgcgggcatggcagtgttaacatggcgaag
ggcatctatcagtcctgcgacgtctatttctatcacttcgcccagcagctcgggatgaac
gtgatctccgacatggcgcgccgttgcggcttgggccaggagttccctctacccgtggcc
agccagttctacggcactgtgcccgatccggagtggaagctgaaaaagtatggccgtgaa
tggcaggccttcgataccgtgaacgcaacaatcggccagggttacatgctgttcaaccca
ttgcagcttgcggtctatgctgcgcggatcgcgaccggtaggaccgtgatgccgcgtctg
attctcgacgggaagccctccaggttcggaagcatgaatttccacggcgatcatgtgcag
atcatccagaatgcgatgagcgacgtgatcaatggccccggcactgccgggcgcgcacgg
ctaccgatcgacgacgtgttgatggccggcaagacaggcaccgcgcaagtggtttcgctc
ggcatctcgaatggcaagaccggcccatggaaatatcgcgaccacggcctgttcatctgc
ttcgccccgttcaacaatccgcgctatgcctgtgcggtggtgatcgaacacggcggcggg
tcaggctctgcctatccgattgcgcgcgacgtcatgacctttctgttcgaccctgccaaa
gcgctggattctctgcatagcttcgagaagcagtggggcggtaaaccggcgcaacgtatg
gcgcgccaatatgcggcattcgttggcgaaatgagcattgccgtaccggaagaaactttc
aacctcgacccgcgagaatcccgggccgctgccgaagcacgcgctcagcccaaatccgat
gcgaccaacaatggcactgcaaagggccagactggcgaggaggtttcttcctcagccaat
ccggacaacgcaacatga
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