Altererythrobacter sp. N1: LBX01_12820
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Entry
LBX01_12820 CDS
T10199
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
altn Altererythrobacter sp. N1
Pathway
altn03030
DNA replication
altn03430
Mismatch repair
altn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
altn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBX01_12820
03430 Mismatch repair
LBX01_12820
03440 Homologous recombination
LBX01_12820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
altn03032
]
LBX01_12820
03400 DNA repair and recombination proteins [BR:
altn03400
]
LBX01_12820
Enzymes [BR:
altn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBX01_12820
DNA replication proteins [BR:
altn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBX01_12820
DNA repair and recombination proteins [BR:
altn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBX01_12820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UBS32358
LinkDB
All DBs
Position
complement(2746403..2747281)
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AA seq
292 aa
AA seq
DB search
MKYQNGTASLEAALSLCAQQPDVRVLRRVGPIDRLVSERATRGRVRRIGIVDTEATSTNA
RSAELLDIAVAVLLVDAAGELIGVEKTLQSLRDPGGPIPAEVTKLTGITNEMVTGRILSQ
EKWARLLSGCDLLVAHNASYDVPIVERFLPEIADQAWACSMRQIGWLDHGFDGAKLGHLL
MQIGRFATGHRAAADVISLCHILAHRDANGRTLMSELLGKAACDTVRIDAKGTDFAIKDR
LRERRYRWDPVGKAWWIEVREDEVDEERRWLEFEIGCRNPVMTVMTARTRFR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatcagaacgggaccgcctcgctcgaggcggcgctttcgctgtgtgcgcagcaa
ccggatgtccgtgtgctacgccgggtcggccctatcgaccggctggtatcggagcgggca
acgcgggggcgtgtgcgtcggatcggtattgtcgacaccgaggcgacatcgacgaatgcc
agaagcgccgagctgctcgacatcgctgttgcggtgctgcttgtcgacgccgcgggcgaa
ctcatcggcgtcgagaaaacgttgcaatcacttcgcgatcctggtggccctatacccgcc
gaagtcaccaaattgaccggcataaccaatgaaatggtgaccggccgtattctgagccag
gaaaaatgggcgcgcctcttgagcgggtgcgatcttctggtcgcccataacgcttcctac
gacgtccctatcgtcgagcggttcctgccggaaattgcggaccaagcatgggcctgctcg
atgcgccagatcggttggcttgaccacggattcgacggcgcgaaacttgggcatcttctg
atgcagatcggccgcttcgccaccggacaccgcgcggccgccgacgtgatcagcctctgc
catatcctcgcgcaccgcgatgcgaacgggcgaacactgatgagcgagcttctgggaaag
gctgcgtgcgacacggttcgtatcgatgcgaagggcacggactttgcgatcaaggaccgc
ttgcgcgagcgccgctaccgctgggatccggtcggaaaagcctggtggatcgaagtccgc
gaagatgaagtcgacgaagaacgccggtggctcgaattcgagatcggatgtcgcaacccc
gtgatgaccgtgatgaccgcgcgcacgcggtttcggtga
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