Altererythrobacter sp. N1: LBX01_14205
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Entry
LBX01_14205 CDS
T10199
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
altn Altererythrobacter sp. N1
Brite
KEGG Orthology (KO) [BR:
altn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
altn03032
]
LBX01_14205
03400 DNA repair and recombination proteins [BR:
altn03400
]
LBX01_14205
Enzymes [BR:
altn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LBX01_14205
DNA replication proteins [BR:
altn03032
]
Prokaryotic type
DNA Topoisomerases
LBX01_14205
DNA repair and recombination proteins [BR:
altn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LBX01_14205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UBS32606
LinkDB
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Position
complement(3026026..3027054)
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AA seq
342 aa
AA seq
DB search
MPAVSCFAMTKLIYVDDDLPGISRKRCGTGWAYYDPEGRLIRDKEEKRRLNAVALPPAYR
DAWFCPAPNGHILATGIDARGRKQYRYHPEFRTARESDKFDGCVTFGNLLPLVRKRVEED
LASRQLTRERAVASVVRLLDLGAVRVGNDSYARRNKSFGATTLRRRHAELTGKTLKLRYK
GKGGKDREVVLSDASLAKVVRAMEDLPGQRLFQYLDDDGDHHAVSSSDVNAYLSETMGEH
FTAKNFRTWHASAMALAELAAAQDILTMKGLLGIVSEHLGNTPAVVRRSYVHPGVIALIE
RQEEWRRSLDMPRATKWLSREERALLSLLETGPSAAELLSAA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgtttcctgcttcgcgatgacgaagctgatctatgtggacgatgatttgccg
ggcatatcccgcaagcggtgcggcactggctgggcatactacgatcccgaaggtcggctg
atccgtgataaggaggaaaagcgtcggctcaatgccgtcgcgctgccaccggcctatcgc
gatgcgtggttctgccccgcgcccaatggccatattctggcgaccgggatcgatgcgcgg
gggcgcaagcaataccgctaccatcctgaattccgcaccgcgcgcgaaagcgacaaattc
gatggctgcgtcacattcggcaatctgcttccccttgtccgcaagcgggtggaggaagat
ctggcatcccgccagctgacccgcgaacgcgccgtggccagcgtggtccgcctgctcgat
ctcggggcggttcgggtggggaatgacagttatgcgcggcggaacaagtcattcggcgcg
accaccctgcgccgccgccatgccgagctgaccggtaaaacgctcaagctgcgttataag
ggcaagggcggcaaggatcgcgaagtggtgctgtcggatgccagcctggccaaagtagta
cgggcgatggaagacctgccggggcagcgtttgttccagtatctcgacgatgatggggat
catcacgctgtttcgtcgagcgacgtcaatgcctacctctctgaaacgatgggggaacat
tttacggccaagaatttccgcacatggcacgccagtgcgatggcgctggccgaactggcg
gcggcacaagatattttgaccatgaagggattgcttggtatcgtttccgagcaccttggc
aatacccccgctgtggtgcggcggagttatgttcatcccggcgttatcgcgctgatcgaa
cgacaggaggaatggcgacggtcactggatatgccacgggcgactaaatggctttcgcgg
gaagagcgggcattgctttccttgctggaaaccgggccaagtgcggctgagctgctatca
gcggcgtga
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