Alteromonas sp. I4: AltI4_00150
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Entry
AltI4_00150 CDS
T10627
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
alto Alteromonas sp. I4
Pathway
alto03030
DNA replication
alto03410
Base excision repair
alto03420
Nucleotide excision repair
alto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AltI4_00150 (polA)
03410 Base excision repair
AltI4_00150 (polA)
03420 Nucleotide excision repair
AltI4_00150 (polA)
03440 Homologous recombination
AltI4_00150 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alto03032
]
AltI4_00150 (polA)
03400 DNA repair and recombination proteins [BR:
alto03400
]
AltI4_00150 (polA)
Enzymes [BR:
alto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AltI4_00150 (polA)
DNA replication proteins [BR:
alto03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AltI4_00150 (polA)
DNA repair and recombination proteins [BR:
alto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AltI4_00150 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AltI4_00150 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BBO25627
LinkDB
All DBs
Position
complement(16908..19685)
Genome browser
AA seq
925 aa
AA seq
DB search
MSSSEKPPFILVDGSSYLFRAFHGMPPLTNSKGQDTGAIYGVINMLKSLIKQYQPTHIGV
VFDAKGKTFRDDIYPEYKANRPPMPEELRSQIAPLHEIIRAMGLPIIIEEGVEADDVIGT
LARQASEQGIDTLISTGDKDMAQLVNQHVTLINTMTNQLMDVEGVKDKFGIPPELIIDFL
ALKGDKVDNIPGVPGVGDKSAQGLLNGIGGINAIYENLDKIAELSFRGAKTLGKKMAEYE
EQARLSYQLATIDINLELEYSPTSLAPTPSNDNALATLFSEYEFKRWYAEVTSGQVATAL
ESAGSQSEDAPTDSEPQSNESIETQYTTVLDEETFEQWLALIQEAPLVAFDTETTSLDYM
EAELVGVSVSAEPGVAAYIPVAHDYPGAPEQLDRVWVLDKLKPWLESADHKKVGQHLKYD
KNVLANYGITLQGIAFDTMLESYVLNSTASRHDMDSLAQNYLGVRTVHFEEIAGKGAKQL
TFNQIELDKAAHYAAEDADITLRLHQALWPKLQNETSLVSILSDIEVPLASVLARMEQRG
VLIDSQQLLQQSQQLANRIVELEKEVHDMAGETFNLSSTKQLQQILFEKLELPVIKKTPK
GAPSTSEEVLQELALDYPLPKLIMEYRGLTKLKSTYTDKLPKMMNHRTGRVHTSYHQAVA
ATGRLSSTDPNLQNIPIRTEEGRRVRKAFIAREGYQIVAADYSQIELRIMAHLSGDKGLL
DAFAHGKDIHRATAAEVFNVAEADVTDNQRRSAKAINFGLIYGMSAFGLAKQLNVSRQEA
QEYMNLYFARYPGVLSYMDTTREFAKEHGYVETVFGRRLYLPDIKASNGARRKGAERAAI
NAPMQGTAADIIKMAMLQVDDWIQKSQSDDVIMIMQVHDELVFEIKRDAIDDNVAQINAI
MEQAATLNVPLKVEAGKGENWEEAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtctgaaaaaccgccatttattctggtagatggttcgtcatatttatttcgt
gctttccacggcatgcccccacttaccaattccaaggggcaggataccggagccatctat
ggcgtgatcaacatgctgaaaagcctgatcaaacaatatcaacccacccacattggtgtg
gtatttgatgccaaaggcaaaaccttccgcgatgatatttaccctgagtacaaagccaat
cgcccaccaatgccagaggaattgcgatcgcagatcgcgccgctacacgagattattcga
gccatggggttgcctattattattgaagaaggcgttgaagcagacgacgttatcggtacg
ttagcgcgtcaggcttctgaacagggtatcgataccctgatcagcaccggcgacaaggac
atggctcagttggttaaccagcatgttactttgatcaacaccatgacgaatcagcttatg
gatgttgaaggggtaaaagacaaatttggtattccgccagaactgatcatcgacttcctt
gcgctgaaaggcgacaaagtcgacaacattccgggcgtaccgggtgtgggtgacaaaagt
gcgcagggtttgctaaatggcatcggtggcatcaacgcgatttatgagaacctggacaaa
atcgccgagctttccttccgtggcgcaaaaacgctgggtaagaagatggcagaatacgaa
gaacaggcccgtttatcgtatcaacttgcgaccatcgatattaatctggagttggaatac
tcccctacttcactggcaccaacccctagtaatgacaacgcgttggcaaccttattcagt
gaatacgaatttaagcgttggtacgcggaggtaacgtccggtcaggtagcaacggcgctc
gaatcggccggaagtcagtctgaagacgcgcccaccgattcagaaccgcaaagcaacgaa
tctattgaaacccagtacacaactgtactggacgaagaaacgttcgaacaatggttagcg
cttattcaagaagcgccgctggtggcatttgacaccgaaaccaccagtctcgactacatg
gaagctgaactggttggtgtatcggtatcggccgaacctggcgttgccgcttatattccg
gttgcacacgattacccgggtgcgccggaacagctggaccgcgtctgggtattagataag
ttaaagccctggcttgaaagcgcagatcacaagaaagtcggacagcatttaaagtacgac
aaaaatgtgctggccaattacgggatcacgctgcaaggcattgcttttgacaccatgctt
gagtcttatgtgctcaacagtaccgcgtcgcgacatgacatggattctctagcgcagaat
tacttaggtgtgcgcaccgtccactttgaagagattgccggtaaaggcgctaaacagctg
acctttaatcaaatcgaattagacaaagctgctcactatgctgcagaagatgccgacatt
acgcttcgcttgcatcaagctctctggccgaagctacaaaatgaaaccagtctggtgagc
attttgagtgacattgaagtacctctggcgtcggtgctggccagaatggaacaacgcggc
gtgctgatcgattcacagcagctattgcaacaaagccaacagctggctaaccgcattgtt
gaactggaaaaagaagttcacgatatggcgggagagacatttaacttaagctcaaccaaa
caacttcagcagattttattcgagaaactcgaactgccggttattaagaaaacccccaaa
ggtgccccgtcgacatcagaagaggtattgcaggagctcgcgctggattacccgctgccc
aagttaattatggagtaccgtggcttaacaaagttaaaaagcacttacaccgacaaacta
ccgaagatgatgaaccaccgcacaggccgggttcatacctcttaccatcaggccgttgct
gcaacgggcagattgtcttctaccgatccgaatttgcaaaacattccgatcagaaccgaa
gaaggccgacgggtaagaaaagcgtttatcgcccgggaaggctatcaaatcgttgccgcc
gactactcgcaaatcgaattgcgaattatggcgcacctgtcgggtgacaaagggttactg
gacgcctttgcccatggaaaagacattcaccgcgccactgcggccgaggtgtttaatgtg
gctgaagcagacgtaaccgacaaccaacgtcgcagtgccaaggccattaactttggttta
atttatggcatgtccgcatttggcctggctaaacaattgaatgtcagtcgtcaggaagca
caggaatacatgaacctgtattttgcccgctaccccggcgtactgtcttacatggacacc
acccgcgagtttgcaaaagagcacggctatgtagaaaccgtctttggccgccgcttgtat
ttgcccgatattaaggccagcaatggtgctcgccgtaagggtgccgaacgcgcagcaatc
aacgcccccatgcagggtacagccgctgatattatcaaaatggccatgttgcaggtggat
gattggatccagaagagtcagtcagatgacgtaatcatgatcatgcaggtgcacgatgaa
ctggtgtttgaaataaaacgcgacgccatcgacgacaacgttgctcaaatcaacgccatt
atggagcaagcagcgacgttaaacgtgccattgaaagtagaagccggtaaaggcgaaaat
tgggaagaagcgcactaa
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