Alteromonas sp. I4: AltI4_07130
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Entry
AltI4_07130 CDS
T10627
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
alto Alteromonas sp. I4
Pathway
alto03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AltI4_07130 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alto03021
]
AltI4_07130 (rpoA)
03400 DNA repair and recombination proteins [BR:
alto03400
]
AltI4_07130 (rpoA)
Enzymes [BR:
alto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AltI4_07130 (rpoA)
Transcription machinery [BR:
alto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AltI4_07130 (rpoA)
DNA repair and recombination proteins [BR:
alto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AltI4_07130 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
BBO26325
LinkDB
All DBs
Position
836871..837857
Genome browser
AA seq
328 aa
AA seq
DB search
MGSVTEFLKPRLVEIENVSPTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEI
DGVLHEYSTKEGVQEDVIEILLNLKGLAVRLEGKNEATLTLVKSGAGPVVAGDIQHDGDV
EIVNPEHVICTLTGEAEISMRIKVELGRGYVPASTRRSSEEDDRPIGRLLVDASYSPVER
IAYTVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRSATILAEQLDAFVELRDISEPVQ
KEEKPEFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASRGLSLGMRLENWPPESIAEKD
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgggttctgtgactgaattccttaaaccgagattagtagagatcgaaaacgtatctcct
actcgtgccaaagtaactttggaacccctggagcgtggctttggccacactttaggtaac
gccttacgtcgcatcttgctgtcgtctatgcctggatgtgcagtaacagaagtggaaatt
gatggcgtacttcacgagtacagcaccaaagaaggtgttcaggaagacgtaattgaaatc
ttgttgaacctgaaaggtttagcggttcgcttagaaggcaaaaacgaagcgacgctaact
ctggtgaaatctggcgctggccctgttgtcgctggtgatatccagcatgatggtgacgta
gaaatcgttaaccctgagcacgtaatttgtactttaactggtgaagctgaaatcagcatg
cgcattaaagttgaattgggccgtggttacgttccagcgtcaactcgtcgttcctctgaa
gaagatgatcgtccaattggtcgtttgttagtggatgcttcctatagccctgtagagcgt
attgcttacaccgtagaatctgcgcgtgttgagcagcgtacagacctggacaagctgatc
attgatatggaaacgaatggtactttggatcctgaagaagccattcgtcgtagtgcaacc
atccttgctgagcaattggatgcgtttgttgaactgcgtgatatctctgagccagtacag
aaagaagagaagccggaattcgatccgattcttcttcgccctgttgatgatctggagctg
acagtacgttctgcgaactgcttaaaagcagaagctatccagtatattggtgacctggtt
cagcgtaccgaagttgagttgcttaagactcctaacttaggtaagaaatcgctaactgag
atcaaagatgttctagcatcacgtggactttctctgggcatgcgcctggaaaactggcca
cctgagagcatcgctgaaaaagattaa
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