Alteromonas sp. I4: AltI4_13090
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Entry
AltI4_13090 CDS
T10627
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
alto Alteromonas sp. I4
Pathway
alto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AltI4_13090 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alto03400
]
AltI4_13090 (xseB)
Enzymes [BR:
alto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AltI4_13090 (xseB)
DNA repair and recombination proteins [BR:
alto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AltI4_13090 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
BBO26921
LinkDB
All DBs
Position
complement(1538170..1538418)
Genome browser
AA seq
82 aa
AA seq
DB search
MSDKASDTSPTFEQTLSELEQIVNEMERGDLPLHDALKKFERGVELSRLSQQALTDAEQK
VKILTEQGNSSALQDFTPDDEL
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgataaagcctccgatacgtccccgacatttgagcaaaccctgtctgagcttgaa
caaatcgtcaatgaaatggaacgtggtgacttgcctctgcacgatgcgctgaagaaattt
gaacgcggcgtagagttatcgcgtcttagccaacaggcactgaccgatgccgaacaaaag
gtaaaaatccttaccgagcaaggtaatagctcagctctgcaggattttacgcctgacgac
gagctgtag
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