Alteromonas sp. I4: AltI4_16010
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Entry
AltI4_16010 CDS
T10627
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
alto Alteromonas sp. I4
Pathway
alto00061
Fatty acid biosynthesis
alto00071
Fatty acid degradation
alto01100
Metabolic pathways
alto01212
Fatty acid metabolism
alto02024
Quorum sensing
alto04146
Peroxisome
Module
alto_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AltI4_16010 (fadD)
00071 Fatty acid degradation
AltI4_16010 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AltI4_16010 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
AltI4_16010 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
alto01004
]
AltI4_16010 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alto04147
]
AltI4_16010 (fadD)
Enzymes [BR:
alto01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AltI4_16010 (fadD)
Lipid biosynthesis proteins [BR:
alto01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AltI4_16010 (fadD)
Exosome [BR:
alto04147
]
Exosomal proteins
Exosomal proteins of breast milk
AltI4_16010 (fadD)
Exosomal proteins of breast cancer cells
AltI4_16010 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF5659
Motif
Other DBs
NCBI-ProteinID:
BBO27213
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All DBs
Position
1877856..1879508
Genome browser
AA seq
550 aa
AA seq
DB search
MEKNWLKHYDPRVTPEIDPDRYASIVDILDESVAKYGDKTAYINMGQEMSFAELDTHSKN
FAAYLQHAGFEPGDAVAIMMPNLLQYPVAMFGILRAGMTVVNVNPLYTARELKHQLNDSG
AKGIVIVQNFAHTLEKVVAETGVKEVLLTSLGDMLPAPKRWVVNFVVKRVKKMVPDFNLP
QAKPFMETLRAGSLLGFEKVEIDNQSLAFLQYTGGTTGVSKGAMLTHRNMIANLEQVSGI
LATVITPGKDLVVTALPLYHIFALTANCLLFLKFGCPNLLITNPRDMPGFVKELSKYPFV
ILPGVNTLFNGLLNTPGFADLDFTNFKFGLGGGMAVQRPVAERWQKVTGTVLLEGYGLTE
CAPVVTVNPPQLDAYKGSIGMPVPSTDIMLVDESGNEVAPGESGEMWVKGPQVMKGYFNR
PEATDEIIRDGWLATGDIARADDDGYFYIVDRKKDMILVSGFNVFPNEIEEVAAMHDAVL
EAAAIGVPHEVSGEVVKLFIVRKDDSLTAEAVIAHCRSHLTGYKVPKHVEFKEELPKTNV
GKILRRELRN
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaaactggcttaagcattacgacccgagagtaaccccggaaatcgatccggac
cgttacgcgtcaatcgttgatattcttgacgaatctgttgccaaatatggcgacaagacg
gcctacattaacatgggtcaggaaatgagctttgcggagctcgatacgcattctaaaaat
ttcgctgcatatctacagcacgccggttttgaaccgggtgatgccgttgccatcatgatg
cctaacctgctgcagtatccggtagccatgttcggtattttacgtgcgggtatgaccgta
gtaaacgtaaaccctttgtacacggcccgggagctaaagcatcagttaaatgacagtggt
gcgaaaggcattgtgattgtgcagaattttgcgcacaccttggaaaaggttgtcgccgaa
actggcgttaaggaagtgctgctgacttcgttgggtgacatgttgcctgcaccgaagcgt
tgggtggtgaacttcgttgtgaagcgcgtgaagaaaatggtgccggactttaacttgcca
caagccaagcccttcatggaaacgttgcgagcaggtagtctgctggggttcgaaaaggtc
gagatcgacaatcaaagtctggcatttttgcaatataccggcggtaccacgggtgtatca
aaaggcgctatgctgacccaccgcaatatgatagccaatttggaacaggtgtcgggtatt
ctggcgactgtgatcacgccaggaaaagacttggtggtaacggcattgccgctatatcac
atctttgcattaacagcgaactgcttgttattcctgaagtttggatgtccgaacctgctg
atcacgaatccccgtgatatgcctggctttgtgaaagaattaagtaagtatccgtttgtg
attctaccgggagtcaataccctgtttaacggattgctcaacacccccggattcgccgat
ttggatttcaccaacttcaaatttgggttagggggcggaatggccgtgcaacgaccggtg
gcggagcgctggcagaaggttaccggtactgtattacttgaaggttacggcctgacagaa
tgtgcgccggtggttacggtgaacccgccgcaactggatgcttacaaaggctcgatcggc
atgcccgtaccgtctacggatattatgctggtggatgagagcggcaatgaagtagcgccc
ggtgagtcgggtgaaatgtgggtaaaaggcccgcaggtcatgaaaggttatttcaaccgc
cctgaagccaccgacgaaattattcgcgacggctggctggccacgggagatattgcccgg
gctgacgacgacggttatttctacattgtggaccgcaagaaagacatgattctggtatcg
ggcttcaatgtgttccctaacgaaatcgaagaagtggcagcaatgcacgacgcggtgctt
gaagcggcagccatcggtgtacctcatgaagtcagcggtgaagtagtgaagcttttcatt
gtcagaaaagacgattcgttaaccgcggaagcggtgattgcgcactgtcggtcacatctt
actggctacaaggtgcctaaacacgtagaattcaaagaagaattacctaaaacaaacgtc
ggtaagattttgcgtcgcgagcttcgtaattaa
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