Alteromonas sp. I4: AltI4_18020
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Entry
AltI4_18020 CDS
T10627
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
alto Alteromonas sp. I4
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alto03016
]
AltI4_18020 (truB)
Enzymes [BR:
alto01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AltI4_18020 (truB)
Transfer RNA biogenesis [BR:
alto03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AltI4_18020 (truB)
Prokaryotic type
AltI4_18020 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBO27414
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All DBs
Position
2111950..2112930
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AA seq
326 aa
AA seq
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MARKRKGRAVNGIVLLDKPLGGSSNQLLQKVRWLFQAQKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDADKEYEVTAKLGIRTTTSDADGEVVEERPVTVSEDEVRQACESFIGHSKQ
IPSMFSALKYQGKPLYTYARQGIEVPREARDITIFALTINRIALPEVDMTVHCSKGTYIR
SLVDDIGQQLGCGAYVTRLHRTKVADYPTDRMVPVESMEAMVSEDVATREFDQIDGLLLP
MDTAVKSLPAIHIDEAQTHRLQHGQSVSGETESALEAGQFYRIYGIIDAETAFLGVGEAI
LNPKDQKAGEGKLYVSPRRTVVYALQ
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaaacgcaaaggccgtgcagttaacggcattgtgttgctcgacaaaccgtta
ggcggctcatcgaatcagttgttgcaaaaggtccgttggttgtttcaggcgcagaaagcg
gggcataccggagcacttgatccactggcaaccggcatgctgccaatctgtttaggagag
gcgactaagttttctcagtttttgctggatgccgacaaagagtacgaggtcaccgctaaa
ctgggtatccgtactacgacgtctgatgccgatggtgaggttgtggaagagcgtccggta
acggtaagcgaagacgaggttcgtcaggcttgtgagtcctttatcggtcacagcaagcag
atcccctctatgttttctgcgttgaaataccagggaaaacccctttatacctacgccaga
caaggtattgaagtaccgcgggaagcccgggacatcacgatttttgcactgacgattaat
cgtattgcgttgccagaagtggatatgaccgtacattgcagcaaagggacttacattcgt
tcactggttgatgacattggtcaacaactgggctgcggcgcctatgtaacccggttgcac
agaaccaaagtagccgattaccccaccgacagaatggtgcctgttgaatcaatggaagcc
atggtgtcagaagatgtcgccacgcgggaattcgatcaaattgacgggctgcttttaccc
atggataccgcagtgaagtcgcttccggcgattcatattgatgaagcgcagacgcatcgc
ctgcaacatggtcaaagtgtcagcggtgaaacagagtcggcactcgaagccggacagttt
tatcgtatctacggtattatcgacgcggaaacggcttttcttggggtgggtgaagcaata
ttgaaccccaaagatcagaaagccggtgaaggcaaattatatgtctcaccacgtcgaacg
gtagtctatgcactgcagtag
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