Alteromonas sp. I4: AltI4_20000
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Entry
AltI4_20000 CDS
T10627
Symbol
msbA
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
alto Alteromonas sp. I4
Pathway
alto02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AltI4_20000 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alto02000
]
AltI4_20000 (msbA)
Enzymes [BR:
alto01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
AltI4_20000 (msbA)
Transporters [BR:
alto02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AltI4_20000 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_21
AAA_22
AAA_29
AAA_25
DUF87
MMR_HSR1
nSTAND3
Lactamase_B_5
RsgA_GTPase
G-alpha
Pex24p
EstA_Ig_like
GxGYxYP_N_2nd
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BBO27612
LinkDB
All DBs
Position
2327551..2329293
Genome browser
AA seq
580 aa
AA seq
DB search
MHSNSPQDLPVKRFFSYLREYKLAFVAAFIGMVGYSGLDTFVISQVQPVIDQALNKQDYD
YLRMAAYLVVPVFILRGIFNFLGSYALSWIGAQVVMKMRQQLFAKYINLPVSFHDQQAKG
NLISKVIYDTDQIARASSKSLAILVREGALVIGILIWMFYLSWQLSLVFLFVGPVVAVIV
SYVTKRFRKVSRNIQQSMGSLTSAVEQVVKGHKVVLMFGGQDKEQQRFAQKNNSNRQQNM
KLAVTQTLSVSTIQVIASIALAVVLYIASTPGLLTDLTAGTFVTIVFYMVMLLKPLKQLT
TVNSEFQKGMAACQSIFAILDEQAETDTGQQDAKRLAGDIRFNDVTFTYPGKSQPAINQI
SMHVPAGSSVALVGRSGSGKSTLSSLITRFYLPQQGDIQVDNTNINAFTLASLRKNIALV
SQQVTLFNDTIANNIAYGVSDSVSRKDIEHAARLAHVMEFADELEQGLDTMVGEDGASLS
GGQRQRVAIARALLLDAPILILDEATSALDTESERMIQDALERLQQNRTSIIIAHRLSTI
ENADQILVIDQGKVVESGKHQQLLEANGAYAQLHALQFGE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaaacagccctcaagacttgccggtaaaacgctttttttcttatttacgcgaa
tacaagttggcgttcgtcgccgctttcattggcatggtaggttattctggcctcgatact
ttcgtcatatcccaagtgcaacctgttatcgatcaggccttaaataagcaggattacgat
tatttgcggatggcggcttatctcgttgttccggtttttatattacgcggcatatttaat
ttccttggaagttatgcgcttagctggattggtgcacaagttgtcatgaaaatgcgccag
cagttgtttgccaagtacatcaatctgccggtcagctttcacgaccagcaggccaagggc
aacctgatctccaaagtgatttacgacaccgatcaaattgccagagcatccagtaagtca
ctggccattctggtgcgggaaggggcgttggtgataggtattctgatttggatgttttac
ctgtcgtggcagctttcgttggtctttctgttcgttgggccggttgtcgcggttattgtt
agctacgtcacaaaacgtttcagaaaagtcagccgcaatattcagcagtccatgggcagc
ctcaccagtgcagtagaacaagtggtaaaaggccacaaagtggtgctgatgtttggaggt
caggacaaagaacagcagcgtttcgcgcaaaagaataatagtaaccgccagcaaaatatg
aaactggccgtgacgcaaacactgagcgtatctaccattcaggttattgcgtcgattgct
ctggcagtggtgttatacatagccagtacgcctggattattaaccgatctgacagccggt
acctttgtaaccattgtgttttacatggtgatgttactcaaaccgcttaaacagctcaca
accgtaaacagtgaatttcagaaaggcatggcggcatgtcaaagcatctttgccattctc
gacgaacaggcggaaacggacacaggtcaacaggatgcaaagcgcctcgccggcgacatt
cgctttaacgatgtgacctttacgtatccgggtaaatcgcaacctgcgatcaatcagatc
agcatgcatgttccagctggcagcagtgtcgcgctggtgggacgctcaggcagtggtaag
tcgacattgtcgtcattgatcacgcggttttatttacctcaacagggcgatattcaggtt
gataacactaatattaacgcctttacgctggcctcgctgcgcaaaaatattgcactggtg
tctcagcaggtaaccttgtttaacgacaccattgctaacaatattgcctatggcgtaagt
gacagcgtgagtcgaaaagacatcgagcacgcggcacgactggcgcatgtcatggaattt
gctgacgagttggaacagggcctggataccatggtgggtgaagacggcgcgagtttatca
ggcggacaacgccagcgcgttgcaattgcccgggcactgttactcgatgcgcctattttg
attttagatgaagccacgtcagcgttggataccgaatcagagcgaatgattcaggatgcg
ctggaacgtctgcaacaaaaccgtaccagtattatcattgctcaccggttatcgaccatt
gaaaacgctgaccaaattctggtcatcgatcagggtaaagtcgtcgaaagcgggaaacat
cagcagctactcgaagccaatggtgcctatgcccaactccatgcgttgcaattcggagaa
taa
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