Alteromonas sp. I4: AltI4_27830
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Entry
AltI4_27830 CDS
T10627
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
alto Alteromonas sp. I4
Pathway
alto00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AltI4_27830 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
alto01007
]
AltI4_27830 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alto03016
]
AltI4_27830 (aspS)
03029 Mitochondrial biogenesis [BR:
alto03029
]
AltI4_27830 (aspS)
Enzymes [BR:
alto01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
AltI4_27830 (aspS)
Amino acid related enzymes [BR:
alto01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AltI4_27830 (aspS)
Transfer RNA biogenesis [BR:
alto03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AltI4_27830 (aspS)
Prokaryotic type
Other AARSs
AltI4_27830 (aspS)
Mitochondrial biogenesis [BR:
alto03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
AltI4_27830 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BBO28395
LinkDB
All DBs
Position
complement(3170925..3172691)
Genome browser
AA seq
588 aa
AA seq
DB search
MRTDYCGNITASYIGQTVTLCGWVNKRRDLGGLIFIDLRDREGIVQVMFDPDLPEVQAIA
NTLRSEFCVKVTGTVRARPEGQVNAQMATGEIEIIGTGLEIFNKSAVLPLDWNQENSEEQ
RLRYRYLDLRRPLMSQRLQFRAKVTAAVRRYLEGDGFLDIETPILTKATPEGARDYLVPS
RTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQPEFTQIDLETTFLD
ADGVMSITEGLIRDLFQQMLDVDLGDFPRMTYAEAMQRYGSDKPDLRNPLELTDVADLLA
AVDFKVFSGPANDPKGRVATIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWIKVNDVAAG
LDGLQSPILKFLNEEIVNGILARTGAQDGDILLFGADSYTVVTEAMGALRLKLGEDFELL
EGEWRPLWVVDFPMFEEVDGQLHALHHPFTSPRGMSPVELAADPVNAISDAYDMVLNGVE
LGGGSVRIHDQSMQSAVFSILGIDKEEAELKFGFLLEALRFGAPPHAGLAFGLDRLVMLM
TGASSIRDVMAFPKTTTAACPLTDAPSPANPQQLADLAIATVKKDSAE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacagattactgtgggaatattactgcatcttacattggccaaaccgtcacactg
tgtggctgggtaaataagcgtcgcgatttaggcggcctgatttttatcgatttacgagac
cgcgaagggatcgtacaggtcatgttcgacccggatcttcctgaagttcaagcgattgcc
aataccctgcgcagcgaattctgcgtgaaggttaccggtacggtgcgtgcccgcccggaa
ggacaggtgaacgcgcaaatggcgaccggcgaaattgaaatcattggcactggactggag
atcttcaataaatctgcagtattaccgctggactggaatcaggaaaactccgaagagcag
cgcctgcgttatcgttacctggacctgcgtcgcccgctaatgagccagcgtctgcagttt
cgcgcaaaagtcacggcggcggtacgtcgttatctggagggcgatggctttttagatatt
gaaacgcccatcctgacaaaagcaacacctgaaggtgcccgtgattacctggtgccaagc
cgcacacacaaaggcgaattttttgcattgccacaatcacctcagctgtttaaacagcta
ctgatgatgtctggcatggatcgctactatcaaatcgtaaaatgtttccgagacgaagat
ttacgtgcggatcgccagccagaatttacccaaatcgacttggaaacgacgtttctcgat
gccgacggcgtaatgagcattacggaaggtttaattcgtgacctgttccagcaaatgctg
gacgttgatttaggtgacttcccgcgtatgacctacgccgaagctatgcaacgttacggc
agtgacaagcccgatctgcgcaacccgctggaattaaccgacgttgcagatttactcgcc
gccgtcgactttaaagtgttcagcggcccggcgaatgacccgaaaggacgcgtagcgact
atccgtgtaccgggtggagcgagcctgtctcgcaagcaaattgacgaatacacgaagttt
gttggcatttacggcgccaaaggtttggcctggattaaagtcaacgacgtggctgctggc
ctcgacggtctgcagtcgccaattctgaagttccttaacgaagagattgttaacggcatc
ctggcgcgtaccggtgcacaggatggcgatatcctgttatttggtgccgacagctacacc
gtggttacggaagcgatgggcgcactgcgtcttaagctgggtgaagatttcgaattgctg
gaaggcgagtggcgacctctttgggttgtggatttccccatgtttgaagaagttgatggc
caattgcatgcactgcaccatccgtttacctctccacgtggtatgtcgccggtagaactg
gctgcggatccggtgaacgcaatttctgacgcctatgacatggtattaaatggtgttgaa
ctgggtggcggttctgtgcgtattcacgaccagtccatgcagtcagcggtgttcagtatt
ttgggtatagataaagaagaagcagaattgaagtttggcttcctgctagaggcattgcgt
tttggtgcgccaccacacgccggtttggcatttggtttggaccgtttggttatgctgatg
acgggcgccagttcaattcgcgatgttatggcgttccccaaaacgaccacggcagcttgc
ccgcttaccgatgccccaagcccggctaatcctcagcagttagctgatctggccattgcc
actgttaaaaaagacagcgcggaataa
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