Alteromonas sp. I4: AltI4_30020
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Entry
AltI4_30020 CDS
T10627
Symbol
flrC
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
alto Alteromonas sp. I4
Pathway
alto02020
Two-component system
alto02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AltI4_30020 (flrC)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AltI4_30020 (flrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
alto02022
]
AltI4_30020 (flrC)
02035 Bacterial motility proteins [BR:
alto02035
]
AltI4_30020 (flrC)
Two-component system [BR:
alto02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
AltI4_30020 (flrC)
Bacterial motility proteins [BR:
alto02035
]
Flagellar system
Flagellar assembly proteins
Others
AltI4_30020 (flrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
Mg_chelatase
MerR
HTH_24
AAA_16
HTH_28
AAA_19
DUF2089
Sigma70_r4_2
HTH_20
HTH_23
FleQ
AAA_3
OKR_DC_1_N
MCM
HTH_10
HTH_11
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBO28614
LinkDB
All DBs
Position
complement(3435364..3436710)
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AA seq
448 aa
AA seq
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MSKTTVLIVEDDAGLREALVDTLLLADYQVVAADSAEQAIMMLGRQPVDIVVSDIQMGEM
NGLALLKAIKAKDANLPVLLMTAYATIDDAVQAMRDGATDYLSKPFAPEVLLNLVGRYAP
AQKVESRQPVVGDPRSEELLLLARKVARSEATVMVLGPSGSGKEVLSRYIHDNSQRASNP
FVAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTLLLDEITEMDLALQAK
LLRVLQEKEVERLGARKTISLDVRVIATSNRDLKEAVARGEFREDLYYRLNVFPITWLPL
GQRSGDIIPLAEHLITRHANQQGLGNFTLSASARNKLLQHAWPGNVRELENVCQRALILC
EGNTIDATDLMIEPATGQAVAVATIEEPEEDNSRLGNELRHQEHQIILDTLTACKGKRKD
VAEKLGISPRTLRYKLARMRDQGIDVPA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaacaactgttttgatcgtagaagacgatgccggtctgcgcgaagcattagtc
gataccctgttattagcagattatcaggtcgttgctgccgacagtgccgagcaagccatt
atgatgctaggccgtcaacctgttgatattgtggtgagcgatatccaaatgggcgaaatg
aatggcctggctttgttgaaagcgattaaagccaaagacgccaatctgcccgtgttgttg
atgacggcctatgccactatcgacgatgccgtacaggctatgcgcgacggcgcaacagac
tatctctccaaaccattcgcgccggaagtattgttaaaccttgtgggcaggtatgcaccc
gcacaaaaggtcgaatcccgtcagccggtagtaggtgatccgcgtagcgaagagctgctg
ctgttagcccgtaaagtcgcgcgttcagaagcgactgtgatggtgttggggccaagtggt
tcgggtaaagaagtcttatcacgctatatccatgacaactcccagcgggcgagtaatccg
tttgttgcaattaattgcgccgctattccggaaaatatgctggaagccaccttatttggt
tacgagaaaggcgcgtttactggcgcaattcaggcctgtccgggtaagtttgagcaagcc
cagggcggtacgctgttactcgacgaaatcaccgaaatggatttggcgttacaagccaaa
ttattacgtgtgctacaggaaaaagaagtcgagcgattgggcgcacgaaaaaccatctct
ttggacgtacgggtcattgcaaccagtaaccgcgacctgaaagaggcggtcgccagaggc
gagttccgtgaggatttgtattaccgcctgaacgtatttcctattacctggttgcctttg
ggtcaacgcagtggcgatattattccgctggcagagcacctgatcacgcggcatgccaac
cagcaaggtcttggtaattttacgttaagtgcgtctgcgcgcaataaactgctgcaacac
gcctggccgggtaacgtgcgtgaactggaaaacgtgtgtcagcgcgcattaattttatgt
gaaggcaacacgattgatgcgaccgatctaatgatagaacctgcaacaggtcaagccgtt
gcggtagcaaccatcgaagagccagaagaagacaacagcagattaggcaatgaattgcgt
catcaggaacatcagatcattctggataccctgaccgcctgcaaaggcaagcggaaagac
gtggctgaaaaactggggatcagccctcgtaccttgcgatataagctagcgcgaatgcgc
gatcagggtatcgacgtaccggcttaa
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