Alteromonas sp. I4: AltI4_30690
Help
Entry
AltI4_30690 CDS
T10627
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alto Alteromonas sp. I4
Pathway
alto03030
DNA replication
alto03430
Mismatch repair
alto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AltI4_30690 (dnaE)
03430 Mismatch repair
AltI4_30690 (dnaE)
03440 Homologous recombination
AltI4_30690 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alto03032
]
AltI4_30690 (dnaE)
03400 DNA repair and recombination proteins [BR:
alto03400
]
AltI4_30690 (dnaE)
Enzymes [BR:
alto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AltI4_30690 (dnaE)
DNA replication proteins [BR:
alto03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AltI4_30690 (dnaE)
DNA repair and recombination proteins [BR:
alto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AltI4_30690 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BBO28681
LinkDB
All DBs
Position
complement(3505383..3508847)
Genome browser
AA seq
1154 aa
AA seq
DB search
MSVNFVHLRVHSDFSMMDGLNKVKPILDKVQELGMPAVAITDQMNMCGLVKFYSESHSRG
IKPIIGCDFWVQSDDFNEDPFRLTLLAMNNDGYKNITLLISKAYLRGHVAQRVVIDKDWL
AEHADGVIVLSGGMRGDIGLCLAKNNPRLLEDNLAFYQTHFPDRFYLELMRTGRRGEEDY
NHSAVALAESADLPVVATNEVCFIEQAGFDAHEIRVSIHDGYTLDDKRRPKLYSDQQYLR
TSEEMAALFEDIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGGMTTEDFLVKVSKEGLE
ERLEFLFPDEEERAKRRPEYDERLEIELGVINQMGFPGYFLIVMEFIQWSKDNNIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAEL
YGRDAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPPDPGMTLKKAFEAEPRL
PELYDMDEEVRELIDMARILEGVTRNAGKHAGGVVIAPTKITDFAPLYCDDEGKNPVTQF
DKNDVETAGLVKFDFLGLRTLTIIQWALDMIKEGQGIDVDIAAIPLEDKKSFRSLQAAET
TAVFQLESRGMKELIKRLKPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEISYPD
AEYQHECLKEILEPTYGIILYQEQVMQIAQEMSGYSLGGADLLRRAMGKKKPEEMAKQRS
TFEDGAKNNNIDPDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKVHYPAEFMAA
VMSADMDNTDKIVTLVDEVGRMEMEILPPDLNKGRYKFTVDAEGRIVYGIGAIKGVGEGP
IEAIIEARETHGAFTDLFDFCAKVDLKRVNKRVLEKLVLSGAMDNLGPHRAALMATLPEA
IAAADQHAKAESFGQSDMFGLLTTEPEQVEQAFADVPKWPEKVWLEGEKETLGLYLTGHP
INQYADEIRNYIDGRLVDLRPTGKDQMSTAVGLVLGVRVMTNKKGRRWAIVTLDDKSARM
DVRFFPDMYEQFESILESDRILLIKGQVSFDDFSGGNTITARDAMDIVQAREKNARALAL
QVDTQWCKPDKLASLQSILQSYSGGSCPVQLDILHPDVAVSLKCGAHWYITPEDQLLHEL
KQCLGEQAVKLAFH
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaatttcgttcatttacgtgtccattctgatttctctatgatggatggcctg
aacaaggtgaagcccatactggataaagtccaggaactcggcatgcctgcggtggcgatc
accgaccaaatgaacatgtgtggactggttaagttctattccgagtcgcattctcgtggt
attaagcccattattggctgtgatttttgggtgcaaagcgacgatttcaacgaagatcct
ttccgcctaaccttgctggccatgaacaacgatgggtataagaatattaccctgctgata
tccaaggcttacctgcgtgggcatgtcgcccagcgcgttgtcatagacaaagactggctg
gctgaacacgccgacggtgtcatcgtgttgtcggggggaatgcgcggcgatatcgggctg
tgtctggcaaagaataaccctcgcttgctggaagacaatctggcgttttaccaaacccat
tttcctgacagattctatttagaattaatgcgtacgggccgacgtggtgaggaagattat
aatcacagtgcggtagccttagccgagtctgccgacttgcctgtggtagcaaccaatgaa
gtctgctttatagagcaagccggttttgatgcacatgaaatccgtgtcagtatccacgat
ggttataccctggacgataagcgtcgtcctaagctttacagcgatcagcagtatcttcgc
acgagcgaggaaatggcggcgctgttcgaagatattcccgaagcattagcgaatacggtt
gaaattgccaagcgctgtaacgtgaccgttcgccttggtgaatatttcctgcctcaattt
ccaaccggcggcatgaccaccgaagattttctggtaaaagtgtctaaagaaggcttggaa
gagcgtcttgaatttctattcccagacgaagaagaacgggcgaagcggcgtccggaatac
gatgaacgtttggaaattgagcttggggttatcaaccagatggggttcccaggttacttc
ctgatcgtaatggaatttatccagtggagtaaggacaacaatattccagttgggcccgga
cgggggtctggtgctggttcattggtggcatacgcgctaaaaattaccgatctggacccg
ctggagtttgacctgctattcgaacgattccttaacccggaacgggtatccatgcccgac
ttcgacgttgacttctgtatggatcgccgggatgaggtcatcgaccacgttgcggaattg
tatggccgtgacgcggtatcgcagatcattaccttcggaaccatggctgcaaaagccgtt
gtgcgtgacgtaggccgggtacttggtcacccttacggctttgttgaccgtatatctaag
ttgataccgcctgatccgggcatgacactgaaaaaggcttttgaagccgagccacgatta
cctgagctgtatgacatggatgaggaagtccgcgagctcatcgatatggcgcggattctg
gaaggggtgacccgaaacgccggtaaacacgccgggggcgtggttattgcgcctaccaaa
atcactgacttcgcaccactgtattgcgatgacgaagggaaaaacccggttacccagttc
gataaaaacgacgttgaaaccgcgggtctggttaagttcgacttcctggggttacggacg
ctcaccattattcagtgggcgctggacatgatcaaggaagggcaggggatagacgtcgat
atcgccgccattccattagaagacaaaaagagtttccgctcgctacaagcggcagagacc
accgcagtattccagctggaatcccgcggtatgaaagagctgatcaagcgcctgaagcct
gactgctttgaagatatcatcgctttggtagccctgttccgcccgggtcctctgcaatca
ggcatggtagataactttatcgaccgtaagcacggccgcgaagagatttcgtatccggat
gcggaataccagcacgaatgcctgaaagaaatcctggagcccacctacggcatcatcctg
tatcaggaacaggttatgcagatcgctcaggaaatgtcagggtacagtctgggcggcgct
gacttgcttcgccgggcgatgggtaagaagaaacccgaagagatggccaagcagcgctca
acctttgaggatggcgcaaagaacaacaatatcgaccctgatctggcgatgaaaatcttt
gacctggtggaaaaattcgccggttacggatttaacaaatcgcactcggcagcctatgcg
ctggtgtcgtaccagacgctttggctaaaagtgcattaccctgccgagtttatggcggcg
gtaatgtcagcggatatggacaacaccgacaaaatcgtcaccttggtagacgaagtcggt
cgcatggaaatggaaatcctgccaccggatttgaataaaggccgttataaatttaccgtg
gatgcagaaggtcgcatcgtttatggtatcggcgcaatcaaaggggtgggcgaaggcccg
attgaagcgattattgaagcccgtgaaacccacggtgcgtttactgatttattcgatttc
tgcgccaaggttgatttaaagcgcgttaacaagcgagtactggagaagctggtactgtct
ggcgcaatggacaatctcggtcctcaccgtgcggcgctgatggcaacgttaccagaagcg
attgccgccgctgaccagcatgccaaagccgagtcgttcggccaatccgatatgtttggc
ctgttaactaccgagccagagcaggttgagcaagcctttgccgacgtccctaaatggccg
gaaaaagtctggttagaaggggaaaaagagacgctgggcttgtatttgaccggacacccc
ataaatcagtatgcagacgagataagaaattacattgacgggcgactcgtagacctgcgt
ccaacgggcaaagaccagatgagtacggcagtgggtctggtacttggtgtacgtgtaatg
accaacaaaaaagggcgtcgctgggctatcgttaccctcgacgataaaagtgcacgaatg
gatgtgcgtttcttccccgatatgtatgaacaattcgaatctatactggaatcagacaga
attctgctgataaaaggacaggtcagctttgatgatttctcgggtggcaatacaatcacc
gcccgagatgcaatggacattgtacaggcccgcgagaaaaacgcgcgagccctggcattg
caagttgatacgcaatggtgtaaacctgataagttagcgtcgttgcaatcaattttgcaa
tcctattccggcggaagttgtccggtacagttagatattttacatccagatgttgcagtt
tcccttaagtgcggtgcacactggtacatcacacccgaagatcagttactgcacgagttg
aagcagtgtttgggtgaacaggcagtgaagctggcctttcattaa
DBGET
integrated database retrieval system
