Alteromonas sp. I4: AltI4_34620
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Entry
AltI4_34620 CDS
T10627
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
alto Alteromonas sp. I4
Pathway
alto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AltI4_34620 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alto03400
]
AltI4_34620 (recO)
DNA repair and recombination proteins [BR:
alto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AltI4_34620 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AltI4_34620 (recO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
DUF5372
Motif
Other DBs
NCBI-ProteinID:
BBO29074
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Position
complement(3945658..3946353)
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AA seq
231 aa
AA seq
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MTPNWLNAYVLHRRPYRETSFLVDFFTYEQGRISAVAKGVRGAKSDKRSLLQPFQALRIQ
LTGKSDLKNLTLIEAAAPALNVSGDALYCAFYVNELTNRVLPQGLAAEMVYQTYGDTLVQ
LKESQRLDRPLREFEMALIAELGVIPDMTTEAFSAEPIVAQGWYDFYAEQGFSAVAQAGR
NSYSGKDLLSLAEGDYTDSAIKTAKRLTRHVLQPFIGDKPLKSRELFLAGR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctaattggctgaatgcctacgtgttgcaccgccgtccttaccgggaaaccagt
tttctggtggatttctttacctacgagcaaggtcgcatcagtgcggtggcaaaaggcgta
cgcggcgcaaagtccgacaaacgcagtttacttcagccgtttcaggcgttgcgtattcaa
ttgaccggcaaatcggacttaaaaaacctgacgctaattgaagctgcggcaccggcactg
aacgtgagcggcgatgcgttgtattgcgcgttttacgtcaatgaactgactaaccgcgtg
ttgccgcaggggctggcggcggaaatggtctatcagacctatggcgacaccctggttcag
ttaaaagaaagccagcgcctggaccgtccgttgcgtgagtttgagatggcgctgatagcg
gagttgggcgtgattccggatatgacaacagaagcgttttctgctgagccgattgttgcc
cagggctggtatgatttttacgccgaacaggggtttagtgcggtagcgcaggccggtcga
aatagttattcgggcaaggatttattgtcgttggctgagggcgattacaccgacagtgcc
attaaaacagctaaacgactgacccgtcatgtattacaaccgtttatcggcgacaagccg
ctgaaaagccgggagttgtttttagccgggcgttaa
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