Alteromonas sp. I4: AltI4_38020
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Entry
AltI4_38020 CDS
T10627
Symbol
nagR
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
alto Alteromonas sp. I4
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alto03000
]
AltI4_38020 (nagR)
Transcription factors [BR:
alto03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AltI4_38020 (nagR)
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_3
Flavi_DEAD
HTH_26
Motif
Other DBs
NCBI-ProteinID:
BBO29414
LinkDB
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Position
complement(4337580..4338608)
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AA seq
342 aa
AA seq
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MSATIKSVAEHAGVSIKTVSRVINNEGTVKPDTLAKVQAAIDELNYKPNKAARDLAGRDN
FVLGYVYDNPNAYYIIDMQKGILNECRANGYELLIHPCDASSRDIIQEILGMVDSARLAG
LILSPPLSEMPEVLSALDEKGVRYVRILSGSEALENGPPCVLVNDYQAAYQITEHLIQQG
HRDIGFIAGEKQHNSTIERQKGFAAALAAHDLRQHPEFVIEGTYSFGTGVESIEKLLTLP
HIPTAVFACNDEIAAGALFGARMRGVDVPATLAIAGFENSPFSRQTFPPLTTASQPTDQI
AQRATSTLIQSLKARKLGNDKQPIPAHVFVPELVVRESTNRS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccacaattaaaagtgttgccgaacatgctggtgtatctatcaaaaccgtttcc
cgtgttatcaacaacgaaggaaccgtaaaacctgatacgctggccaaggtgcaggccgcc
attgatgaacttaattacaagcccaacaaggcggctcgggatttagccggacgcgataat
tttgtgctcggttacgtatacgacaacccaaatgcgtattacatcatcgatatgcagaaa
gggattttgaatgagtgccgggcgaacgggtacgaattgctcattcacccttgtgatgcc
agcagccgcgatatcattcaggaaatcctcggcatggtggatagcgccagattggccggg
ctgatcttatcgccgccgttatcagaaatgcctgaagtgctgtctgccctcgacgaaaaa
ggcgtgcgttatgtacgcattctgtcgggcagtgaagcgctggagaacggtccgccttgt
gttctggtaaacgactatcaggcggcttaccaaattactgagcaccttattcagcagggt
catcgtgacattggctttattgccggtgaaaagcagcacaactcgaccatagaacgtcag
aaaggctttgctgccgcacttgctgcccatgatcttcgtcagcatcccgaatttgtcata
gaagggacctattcatttgggaccggggtggaaagtatcgaaaagctgcttacgttaccc
cacattccgacagcggtatttgcctgtaacgatgagattgcggcgggggccttatttggt
gcgcgtatgcgaggggtggatgtgcccgcaacgctggcgattgccggattcgagaacagc
ccgttctcgcggcagacctttccgccattgacgacggcctcacagccaacggaccagatt
gcgcaacgtgcgacgtccactctgatccagtcgttgaaagcccgtaagttgggcaacgac
aaacagcctattccggcgcatgtgtttgtgcctgaattggtggttcgagaatccactaac
cggtcttag
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