Alteromonas sp. I4: AltI4_39280
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Entry
AltI4_39280 CDS
T10627
Symbol
rimK_2
Name
(GenBank) putative alpha-L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
alto Alteromonas sp. I4
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alto03009
]
AltI4_39280 (rimK_2)
Ribosome biogenesis [BR:
alto03009
]
Prokaryotic type
ribosomal protein modification factors
AltI4_39280 (rimK_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
Dala_Dala_lig_C
R2K_3
ATP-grasp_2
ATP-grasp
ATP-grasp_5
GARS_A
DUF7804
Motif
Other DBs
NCBI-ProteinID:
BBO29540
LinkDB
All DBs
Position
complement(4497070..4497978)
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AA seq
302 aa
AA seq
DB search
MKICILSRNKKLYSTRRLKEAAEARGHEVDIIDTLHCYMDITSNKPSVRFKGQPLPKYDA
IIPRIGASITFYGTAVVRQFEMMGSFSLNESVAISRSRDKLRSMQLLSRKGIGLPRTGFA
HSPDSVKDLIKNVGGAPLVIKLLEGTQGIGVVLADTNKAAESIIEAFMGIKANILVQEFI
KEAGGADIRCFVIGGKVVAAMKRQGAPGEFRSNLHRGGSATLIKLTSVERTTAVAAAAAM
GLNVCGVDLLRSSHGPVVMEVNSSPGLEGIEAATGKNVADMIIEFIEAKKSKPHNTKTKG
QG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttgtattttgtcacgtaataaaaaactgtattcaactcgtcgtctgaaagag
gcagcggaagccagaggtcacgaagtcgacattattgataccttgcactgctacatggat
atcaccagtaataagccttctgtgcgctttaaaggtcagccgctaccgaaatacgatgcc
attattcctcgtattggagcgtcaattaccttttatggaacagcggttgttcgccaattt
gaaatgatgggtagctttagtttgaatgagtcggttgctattagccgttctcgggataag
ttgcgttccatgcagttgttgtctcgcaagggaattggtttgccgcgcacggggtttgcc
catagcccggacagcgtcaaagacctgatcaaaaatgtcggtggagcgccattggttatt
aagttgcttgagggcacacaaggcattggtgtagtgcttgccgacactaacaaagcggct
gaaagtatcatcgaagcctttatggggataaaagctaacatcctggtgcaggaatttatt
aaagaagctggcggtgcggacattcgctgctttgttattgggggcaaagttgtggcggcc
atgaagcggcagggcgcgccaggcgaatttcgttctaacttgcatcgcggaggcagcgcc
acgttaattaaactgacatcggttgagcgcacaactgcggtggctgcggcagcggctatg
ggtctgaatgtatgtggtgtcgatttactgcgctctagccatggcccggttgtcatggaa
gtaaattcatcacctggccttgaaggaattgaagccgcaacaggtaaaaatgtcgctgat
atgatcatcgaatttatcgaggcaaagaagagtaagcctcacaatactaaaaccaaaggt
cagggttaa
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