Alteromonas sp. I4: AltI4_40670
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Entry
AltI4_40670 CDS
T10627
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alto Alteromonas sp. I4
Pathway
alto03420
Nucleotide excision repair
alto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AltI4_40670 (uvrD)
03430 Mismatch repair
AltI4_40670 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alto03400
]
AltI4_40670 (uvrD)
Enzymes [BR:
alto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AltI4_40670 (uvrD)
DNA repair and recombination proteins [BR:
alto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AltI4_40670 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AltI4_40670 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_22
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BBO29679
LinkDB
All DBs
Position
4682409..4684577
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AA seq
722 aa
AA seq
DB search
MDVSELLDELNDKQREAVAAPLSNSLILAGAGSGKTRVLVHRIAWLMQVENIAPYSILAV
TFTNKAAREMRGRIESLMGRPLNTMWIGTFHGLAHRLLRAHYAEANLPENFQILDSDDQY
RLVRRVLKAMNLDEKHWAPRQIQWYINGNKDEGLRPQHIETHGDHTQQKMRDIYAAYQDA
CDRSGLVDFAELLLRAHELWVKNPELLSHYQRRFRAVLVDEFQDTNNIQYAWLRLLCGHD
NNIMIVGDDDQSIYGWRGANVDNIQHFLRDFNDATTIRLEQNYRSTGTILKAANAVIEHN
QGRLGKELWTDGDNGEPISIYAGFNELDEARFIISQIADWQNQGNQLRESAILYRNNAQS
RVLEEALLHQGLPYRIYGGLRFFERQEIKDALGYMRLVSHAHDDAAFERVVNTPSRGLGE
RTLATIREHARVQNCSMWQASLQLLQEKGLKGRAANALEQFINLITAMDEACAELPLEEQ
AEYAFRQSGLYAMYQAEKGEKAQARLENLEELVTACKQFVVPEEADEMTPLAAFLAHASL
EAGETQATGEQDAVQLMTIHTAKGLEFPLVFMAGVEEGMFPSQMTNEEPGRMEEERRLCY
VGMTRAMKKLYMTYAEMRRLYGQEKYHTASRFLREIPVECVEEIRLKTTVSRPVPNRFSR
SVSHESFEQSGFTLGQRVRHRKFGEGVVLNYEGSGDHARVQVNFDEFGSKWLVLSFAKLE
PA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctccgagttactcgacgaattaaacgataaacaacgcgaagccgttgccgcc
cctttgtctaacagcctgatcctggctggtgcaggcagtggtaaaacccgtgttctggtg
caccgcatcgcttggttaatgcaggtcgagaacatcgcgccctacagtattctggctgta
acctttaccaacaaggccgccagagagatgcgtgggcgaatcgaaagcctcatggggcgt
ccgcttaacactatgtggattggtacattccacggcctcgcgcaccgtttgttgcgcgcg
cattacgccgaagccaacttaccggaaaacttccagatcctggattctgacgatcaatac
cggctggtacgtcgtgtattaaaagccatgaacctggacgaaaaacactgggcaccgcgt
cagattcaatggtacatcaacggcaataaagacgaaggtctgcgcccgcagcacattgaa
acccacggcgatcacactcagcagaaaatgcgtgatatttatgcggcgtatcaggatgcc
tgtgaccgctcggggttagtcgactttgctgaactcttactgcgcgcccacgaactgtgg
gtcaagaacccggaactacttagccactatcagcgccggttccgcgcggtactggtagac
gaattccaggataccaacaacatacagtatgcctggctacgcctgttatgcggccacgac
aacaatattatgattgtgggagacgacgaccagtccatttatggctggcgtggcgcaaat
gtcgataacattcaacacttcctgcgtgatttcaacgacgccaccacaattcgtctggaa
caaaactaccgctccaccggcactatattgaaagccgccaacgcggttattgaacacaat
caggggcgtttgggtaaagagttgtggaccgacggagacaatggtgaacccatttccatt
tatgccgggttcaacgaactcgacgaagcccggtttattatttcgcaaattgccgactgg
cagaaccagggcaatcaattgcgcgaaagtgccattttataccgcaacaacgcacaatca
cgtgtgctggaagaggccttgcttcatcaagggctgccataccgtatttacggcggtttg
cgattcttcgaacgtcaggaaattaaagacgcactgggctatatgcgtttagtgagccat
gcccacgatgacgcggcttttgaacgagtcgttaatactccaagccgcggattaggtgaa
cgtacgctggccacaatccgtgagcacgcccgagttcaaaactgctcaatgtggcaggcc
agcttgcagttattgcaggaaaaaggcctgaaaggccgcgctgctaatgcccttgagcag
ttcattaacctgattaccgccatggatgaagcctgtgcagaactgccgttagaagaacaa
gcggaatacgctttcaggcagtctggtttgtacgcgatgtatcaggccgagaaaggcgaa
aaagcccaggcacgactggaaaacttagaagaactggttaccgcctgtaagcaatttgtg
gtgccggaagaagccgatgagatgacaccattggcggcattcttggctcatgcctcattg
gaagcaggcgaaacccaggctaccggcgagcaggacgcagtgcagttgatgactatccat
accgcaaaaggtctggagtttccgttggtctttatggctggcgtggaagaagggatgttc
ccaagccaaatgaccaatgaagaacccggtcgcatggaagaagaacgccgactctgctac
gtaggcatgacccgcgccatgaagaaactgtatatgacctatgcagaaatgcgccgcctg
tacggacaagaaaaataccacactgcgtcacgttttttgcgcgaaatcccggttgagtgc
gtagaagagataagactcaagaccacagtttcccgcccggtgccgaaccgctttagtcgc
tcagtgtctcacgagagttttgaacaaagcggctttacattgggacaacgcgtccgacac
agaaagtttggtgaaggtgttgtgctaaactatgagggtagcggtgatcacgccagggtt
caggtgaattttgacgaatttggcagtaagtggctggtactaagtttcgcaaaactcgaa
ccggcatga
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