Alteromonas sp. RW2A1: BM528_01060
Help
Entry
BM528_01060 CDS
T10273
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
altr Alteromonas sp. RW2A1
Pathway
altr03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
altr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BM528_01060
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BM528_01060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
APE04538
UniProt:
A0AAC9NUC7
LinkDB
All DBs
Position
complement(230468..233293)
Genome browser
AA seq
941 aa
AA seq
DB search
MDKIEIRGARTHNLKNIDLTLPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLMFARVGTPRC
PDHDVPLDAQTVSQMVDKVLAMPEGSKLMLLAPIIKERKGEHVKALQNLSAQGFIRARID
GEVCDLSDPPPLDLHKKHTIEVVVDRFKVRDDLALRLSESFETALSLAGGNAVIADMDDK
DAEEIVFSANFACPHCGYSLSELEPRLFSFNNPAGACPTCDGLGTRNFFDPSRIITNTEL
SLSGGAIRGWDKRSYYYFQMLQAVADHYKFSLTAPFEELEDAHKDIVLYGSKGKSLSFKY
INERGDIMERKHPFEGIIPNMERRYRETESNSVREELGKYLSQQHCSSCNGSRLRVEARN
VFIQQTTLPTIADMSIAEAYTFFETLDLAGQKAQIAEKILKEILDRLRFLVNVGLNYLSL
SRSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNT
VLVVEHDEDAIRQADHVIDIGPGAGVHGGEIIAEGTIDDILKSEHSLTGKYLSRREKIDI
PEKRTPAKDNKWLTLKGATGNNLQSVDLRIPTGVMTCVTGVSGSGKSTLINDTFYKIAQR
ELNKATTAEAAPHVSMEGLELLDKVVDIDQSPIGRTPRSNPATYAGIFTPIREMFAGTQE
ARSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCMGKRYNRETLDVKY
KDKNIHEVLEMTVEDARKFFDAVPSISRKLQTLMDVGLSYIKLGQAATTLSGGEAQRVKL
AKELSKRDTGQTLYILDEPTTGLHFHDIKQLLAVLHELRDHGNTVVVIEHNLDVIKTADW
IVDLGPEGGSGGGLIIAEGTPEHVAEQEVSHTGRFLKPLLE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatcgaaatacgcggtgcacgcactcacaacctgaagaatatcgatttgaca
ctaccacgagacaagctggtagtaataactggtctttccggatcgggtaaatcgtctctt
gcatttgacaccttgtacgctgagggtcagcgtcgttacgttgagtcactctctgcttat
gcgcgtcaattcctctcaatgatggaaaaaccagatgttgaccacattgaaggcttatcg
cctgccatttcgattgagcaaaaatctacgtcgcacaacccgcgttctacggtgggcaca
attaccgagatttatgactacctgcgtttgatgtttgccagggtgggaacccctcgttgt
cctgaccacgacgttccacttgatgcacaaaccgtaagtcaaatggtggataaggtgctg
gctatgccagaaggcagcaaattgatgcttcttgcacctatcattaaagaacgtaaaggg
gagcacgttaaagccttgcagaatttgtctgcccaagggtttattcgcgctcgcattgat
ggtgaagtgtgcgatctttccgatcctccaccgctggacctgcacaaaaagcataccatt
gaggtggtagtagacaggtttaaagtgcgcgatgatttggcacttcgcctatcagaatct
tttgaaaccgcgctttcccttgctggcggtaacgctgttattgctgacatggatgacaaa
gatgcagaagaaattgtattttctgcaaattttgcctgtcctcattgtggctatagcttg
agcgaattagagcctagactattttcatttaacaatcctgctggtgcctgtcctacttgt
gatggcttaggcacccgaaactttttcgatccttcacgcattatcaccaacactgagctt
agcttgtctggtggtgcaatccgcggatgggacaaacgcagttattattatttccaaatg
ctgcaagcagttgctgatcactataagtttagcttaacagcccctttcgaagagctagaa
gacgcacataaagacattgttctgtatggctcaaagggtaaatcgttatcgttcaaatat
attaacgagcgcggcgatattatggagcgtaagcaccctttcgaaggcattattccgaat
atggagcgacgctatcgcgagaccgagtcaaactctgtgcgcgaagagcttggcaaatat
ctcagccaacagcactgcagtagctgcaacggttcacgtctacgcgttgaagcgcgtaac
gtatttattcaacaaaccacgctgcccactattgccgatatgtcgatagccgaggcatat
acgttttttgaaactctcgatttagccggccaaaaagctcaaatagcagaaaagatccta
aaagaaatactcgatcggctgcgctttttagttaacgttgggcttaattatctgtcactg
tctcgtagtgcagacacactttcaggtggcgaagcccagcggattcgcctcgctagtcaa
attggtgcaggacttgttggcgtaatgtatgtgcttgatgaaccctccatagggttgcac
cagcgagacaacgagcgactactaaaaaccctgacgcatttacgggacctaggcaataca
gtgctcgttgttgaacatgacgaagatgccattcggcaagcagaccacgttattgatatt
ggccctggtgctggcgtacacggcggtgaaattattgctgaaggcaccatcgacgacatt
cttaaaagtgagcactcgcttacagggaagtacctatctagacgtgaaaagattgatatt
ccagaaaagcgcacgccagcgaaagataacaagtggctaacgcttaaaggtgccacaggc
aacaacttacaatctgttgatttacgcatacctacgggcgtgatgacctgtgtaactggc
gtgtctggctcaggtaaatcgacgctaattaacgacactttttataagattgcccagcgt
gaattaaacaaggctaccacggcagaggctgcacctcacgtgtcgatggagggtttagag
ctactcgacaaggtggttgatattgaccaaagccctattggtagaactccacgctctaac
ccggcaacctatgctggtattttcacgccaataagagaaatgttcgcaggcacccaagaa
gcccgctctaggggttacaagccaggacgctttagctttaacgtgaaaggcggccgctgc
gaggcgtgtcagggcgacggtgttattaaagttgaaatgcacttcctccccgatgtgtac
gtgccttgcgatgtatgtatgggcaaacggtacaaccgcgaaaccttggatgtaaaatac
aaagacaagaatattcacgaagtgctagagatgacggtggaagatgcaagaaaattcttc
gatgcagtcccctctatttctcgcaaattgcagacattgatggatgtcggtctctcttat
atcaagttaggacaggcagcgacaactttgtcaggtggtgaggctcagcgtgtaaaatta
gcaaaagagttgtcaaaaagagacactggtcaaacgctttacatacttgacgagccgaca
acaggtttgcacttccacgacatcaaacaactactggcggtactgcacgagctgcgcgac
cacgggaataccgtggttgtcatagaacataacctcgatgttattaaaacggctgactgg
attgttgaccttggccctgaaggcggatcaggaggtggcctgattattgctgaaggaaca
ccagagcatgttgctgaacaagaagtgtcgcatacaggtcgtttcttaaagcccttgctc
gagtaa
DBGET
integrated database retrieval system