Alteromonas sp. RW2A1: BM528_02985
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Entry
BM528_02985 CDS
T10273
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
altr Alteromonas sp. RW2A1
Brite
KEGG Orthology (KO) [BR:
altr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
altr03032
]
BM528_02985
03400 DNA repair and recombination proteins [BR:
altr03400
]
BM528_02985
Enzymes [BR:
altr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BM528_02985
DNA replication proteins [BR:
altr03032
]
Prokaryotic type
DNA Topoisomerases
BM528_02985
DNA repair and recombination proteins [BR:
altr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BM528_02985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
RTX_C
Motif
Other DBs
NCBI-ProteinID:
APE04862
UniProt:
A0AAC9JG91
LinkDB
All DBs
Position
complement(665343..666320)
Genome browser
AA seq
325 aa
AA seq
DB search
MELIYVDDNLPGITRKRKNDTWLYFDPVGNRITDDKIIHRLNALALPPAYKDAWFCPEEN
GHILATGIDSKGRKQYRYHPEFRAQQEEKKYEACAVFGNKLPLLRARLISDLQGDELTVE
RTVAAIVRLMDLGALRVGNERNVKLNKSFGATTLRNRHAKLTGKNIQLRYRAKSGKEREV
NITDRVLSQVIKALQDLPGQHLFQYISNGERINVTSSEVNNYIQRIMGEEFSAKHFRTWR
ASTIAFEQLAKARGNLTLTVMLDSVAKQLGNTPSIARKSYVHPALIDLCKKDEETQRAWR
QSLSLPRKTKYLSRYERGLLAFLKE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggaattgatttatgttgacgataacttacccggcattactaggaagcgtaaaaacgat
acgtggctttatttcgatccggttggcaacagaataacagatgacaagattatccatcga
ttaaacgcattggcgctacctcccgcttataaagacgcttggttttgcccagaggaaaac
ggccacattcttgccacaggcatcgacagtaaaggccgtaaacaataccgttatcaccca
gagtttagagcacaacaagaagagaaaaaatacgaggcttgcgcggtatttggtaacaag
cttcccttgttaagagctcgcctgatatctgatctgcagggagatgaacttaccgttgag
cgcacagtagcggcaattgtcaggctcatggacttaggtgcgcttagggttggcaatgaa
cgcaatgtaaaactcaataagagttttggcgccactacgttgcgaaaccgtcacgccaag
cttactggtaaaaatatccagcttaggtatcgtgcaaaatcgggtaaggagcgagaggta
aatataacggatagagtgctaagccaagtgattaaagcgcttcaagaccttcccggtcag
caccttttccaatacatcagtaatggcgagcgaatcaatgttacctccagtgaagtgaat
aactatattcagcgcattatgggagaagagtttagcgccaaacactttagaacgtggcga
gcaagcacaattgcatttgagcaactcgcgaaagctaggggaaaccttacgttaacggtt
atgctcgatagcgtcgctaagcaactaggcaacacgccctctatcgcccgtaaatcttat
gttcaccctgcgctaattgatttatgtaaaaaagatgaggaaactcaaagggcatggcga
cagtctctctctttacctagaaaaacgaaatacttaagccgctatgaacgcgggcttctc
gcatttttaaaagaatga
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