Alteromonas sp. RW2A1: BM528_06005
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Entry
BM528_06005 CDS
T10273
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
altr Alteromonas sp. RW2A1
Pathway
altr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
altr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BM528_06005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
altr03019
]
BM528_06005
03016 Transfer RNA biogenesis [BR:
altr03016
]
BM528_06005
Enzymes [BR:
altr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BM528_06005
Messenger RNA biogenesis [BR:
altr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BM528_06005
Transfer RNA biogenesis [BR:
altr03016
]
Prokaryotic type
tRNA degradation factors
BM528_06005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
APE05387
LinkDB
All DBs
Position
complement(1355554..1357665)
Genome browser
AA seq
703 aa
AA seq
DB search
MTPITKSFQYGQHTVTLETGVIARQATAAVLASMDDTSVLVSVVGKKEANAGQDFFPLTV
NYQEKAYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFKNEVQIIITVMSAN
PDIPTDIISLIGTSAALAISGMPFNGPVGAARVGYSNGEYILNTRAEEQESSELDLVVAG
TEGAVLMVESEANVLSEDTMLGAVMYGHEQMQTVVNAVNEFAAEVGTEKWDWKPEAENTS
LKDKVKALAEAEMTAAYQISDKLERKDAVVAATEKALAAIVAEDEEQDQKEVLDLLHELE
SDVVRSRILSGEPRIDGRDPKMIRAIDVATGILPRTHGSSLFTRGETQAIVAATLGTERD
AQMIDELQGKRDSRFMLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIQAVMPSEEEF
PYVVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKSDDNFVVLSDI
LGDEDHLGDMDFKVAGTTDGITALQMDIKIEGITKEIMQIALKQAKEARLHILKVMDEAI
GGHREELSEFAPRIYTMKVDQDKIRDVIGKGGAMIRQITEESDTNIEIEDDGTIKIFATE
RAKAEIAIAKIEQVTAEIEVGKTYNGKITRIVDFGAFVEVLPGKEGLVHISQIAHERVNK
VTDYLKEGEMVDVKVMEIDRQNRVRLSIKELLEKPAPKSDDAE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctattactaaatcatttcagtatggtcagcatactgtaactctagagacgggc
gtaattgctcgtcaggcaacagctgcggttttggcaagtatggacgacacgtctgtattg
gtatcggtagttggtaagaaagaagcgaacgcaggtcaagatttcttcccactaacggta
aactaccaagaaaaagcgtatgctgcgggtaaaatccctggtggattcttcaagcgtgaa
ggccgtccatctgaaggtgaaacgttaattgcacgtcttattgaccgtccaattcgtcca
cttttccctgaaggcttcaaaaatgaagttcagattatcatcactgtaatgtctgctaac
ccagatattcctactgacatcatctcacttattggtacctctgcagcactagccatttct
ggtatgccgtttaacggtccagtcggtgcagctcgtgtgggatacagcaatggtgaatat
attcttaatacacgtgctgaagagcaagaatcaagcgaacttgacttggttgttgctggt
acagaaggtgcggtattaatggttgaatctgaagccaatgtgctttcagaagacactatg
cttggtgccgttatgtacggtcacgagcaaatgcaaactgttgttaatgcggtaaatgaa
ttcgcggctgaagttggtactgaaaagtgggactggaaaccagaagcggaaaatacatcg
ctaaaagacaaagtaaaagcgttagctgaagcagaaatgacggctgcttaccagatttct
gacaagctagagcgtaaagacgcagttgttgctgcgacagaaaaagcgcttgcagccatt
gttgcagaagacgaagagcaagaccaaaaagaagtacttgaccttcttcacgagcttgag
tctgacgtagtacgttcacgtattctttctggcgagccacgcatcgacggtcgcgaccct
aaaatgattcgcgccattgatgtggctacaggcattttaccgcgtactcatggttcgtca
ttgtttactcgtggtgaaacgcaagccatcgttgcagcaacgcttggtacagagcgtgat
gcacagatgattgacgagcttcagggtaagcgcgatagtcgcttcatgcttcactacaac
ttccctccatactgtgtgggtgaaactggttttgttggttcgccaaagcgtcgcgaaatt
ggccacggccgtttagcaaagcgcggtattcaagcagttatgccaagtgaagaagaattc
ccgtacgtagtacgtgtagtatctgaaatcactgagtctaacggttcatcatctatggcg
tcagtatgtggtacttcacttgcgcttatggatgcaggtgttcctatcaaggcatctgtt
gctggtatcgcaatgggtcttgtgaaaagtgatgacaactttgttgtactctcagacatc
cttggtgacgaagatcaccttggcgatatggactttaaagtagcgggtactaccgatggt
attactgcacttcaaatggacataaagattgaaggtattactaaagagatcatgcagatc
gcacttaagcaggctaaagaagcacgtttgcatatcttaaaagtgatggatgaagccatt
ggcggacatcgcgaagaactaagtgaatttgcacctcgcatctacaccatgaaggtagac
caggataagatccgtgatgtgattggtaaaggcggcgcaatgatccgtcaaatcactgaa
gagtctgataccaacatcgaaattgaagatgacggcactatcaaaatcttcgcaacagag
cgtgcgaaagcagaaatcgctattgctaagattgagcaggttactgccgaaatcgaagtg
ggtaaaacctataacggtaaaattacccgcatcgttgacttcggtgcgttcgtggaagta
cttccaggtaaagaaggtcttgtacacatttcacaaatcgctcacgagcgtgtgaataaa
gtaactgactatcttaaagaaggtgagatggttgatgttaaggttatggaaattgatcgc
caaaaccgcgtacgtctaagcattaaagaacttctagaaaagcctgcgcctaagtctgac
gacgcagagtaa
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