Alteromonas sp. RW2A1: BM528_09775
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Entry
BM528_09775 CDS
T10273
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
altr Alteromonas sp. RW2A1
Pathway
altr02020
Two-component system
altr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
altr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BM528_09775
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BM528_09775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
altr02022
]
BM528_09775
02035 Bacterial motility proteins [BR:
altr02035
]
BM528_09775
Two-component system [BR:
altr02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
BM528_09775
Bacterial motility proteins [BR:
altr02035
]
Flagellar system
Flagellar assembly proteins
Others
BM528_09775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
HTH_24
Mg_chelatase
MerR
AAA
AAA_19
AAA_16
HTH_28
Sigma70_r4_2
AAA_7
HTH_23
bpMoxR
HTH_20
DUF2089
AAA_3
HTH_10
HTH_11
Motif
Other DBs
NCBI-ProteinID:
APE06016
UniProt:
A0AAC9JIQ6
LinkDB
All DBs
Position
complement(2202261..2203604)
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AA seq
447 aa
AA seq
DB search
MSKTTILIVEDDAGLREALLDTLLLGDYDVIDADCAESALMILSARNVDLVVSDIQMGEM
SGLTLLKSIKAKYPSMPVLLMTAYATIDDAVQAMRDGATDYLSKPFAPEVLLNLVGRYAP
AQKIESRTPIVADPSSIKLLELSRKVAKSEATVMVLGPSGSGKEVISRYIHDQSNRSESP
FVAINCAAIPENMLEATLFGYEKGAFTGAVQACPGKFEQAQDGTLLLDEITEMDLALQAK
LLRVLQEREVERLGGRKTVKLNVRVIATSNRDLRKAVDNGEFREDLYYRLNVFPIEWRPL
AQRPGDIVPLAEHLIQRHASQQGLGNIRLSAAGRSKLSQYQWPGNVRELENVVQRALILC
ENGEIDSSDLMIDESEALSTDTNSAIEQNEDSHLGSELRYQEHQIILDTLASCNGKRKDV
AEKLGISPRTLRYKLARMRDDGIEVPA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaactactattttaattgttgaagatgacgcaggtcttcgcgaagcgctcctc
gatacgctattgcttggcgattacgacgtcatagatgccgattgtgcggagtctgcactt
atgatcctttccgctagaaatgtagacttggtggtgagtgatattcaaatgggtgaaatg
agcggtcttactctgctaaagagcattaaggcaaagtatccaagtatgccagtgctacta
atgacagcgtacgccacaatcgatgatgcggtgcaggccatgagagatggcgctacagat
tacctatcgaaaccttttgcaccggaagtgttgctgaatttagtggggcgttatgcacct
gcacaaaaaatagagtcgcgcacaccaattgttgcagatccctctagtatcaagcttctt
gagctatctcgtaaggtagcaaaatcagaggccaccgttatggtacttgggcctagtggc
tcaggaaaagaggtgatatcacgctacatacacgatcagtcaaatcgcagtgagtcgcct
tttgtcgctattaactgtgccgctatccctgaaaatatgcttgaagcaaccttgttcggt
tatgaaaaaggtgcatttaccggcgctgtacaagcctgtcctggaaaattcgaacaagcg
caagacggcacattacttctcgatgaaatcacagaaatggatttagctctgcaggccaag
ctgctacgggtattgcaagagcgagaggtagagcgattgggcggtcgaaaaacagtaaaa
ctgaatgtgcgagttattgcaacgagtaaccgagatttacgtaaagcggttgataatggt
gaattcagagaagatttatactatcgacttaacgtgtttcctattgaatggcgtccgcta
gcgcagcgtccaggcgatatcgtgccacttgctgagcacctcattcagcgccatgcaagt
cagcaaggactgggtaacataaggttgagtgcagcagggcgaagcaagttgtctcaatat
caatggcctggaaacgtacgtgagcttgaaaatgttgtacaacgagcgcttattttgtgc
gagaacggtgaaattgattcaagtgatttgatgattgatgaaagcgaagcactgtcaaca
gacacgaatagtgctattgagcaaaatgaggatagccacctcggctcagagttgcgctat
caagagcaccagataattttggatacgctagcgtcctgcaacggcaaacgaaaagatgta
gcagaaaagttaggaattagcccaaggacacttcgttataagcttgctcgtatgcgcgac
gacggcatcgaggtcccagcataa
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