Alteromonas sp. RW2A1: BM528_10680
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Entry
BM528_10680 CDS
T10273
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
altr Alteromonas sp. RW2A1
Brite
KEGG Orthology (KO) [BR:
altr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
altr03016
]
BM528_10680
Enzymes [BR:
altr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BM528_10680
Transfer RNA biogenesis [BR:
altr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BM528_10680
Prokaryotic type
BM528_10680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
APE06170
LinkDB
All DBs
Position
complement(2425265..2426236)
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AA seq
323 aa
AA seq
DB search
MARRRKGRDINGIVLLDKPLGGSSNQLLQKVRWLYKAVKAGHTGALDPLASGMLPLCLGE
ATKFSQFLLDAEKTYEVTAKLGVRTTTSDADGEVVEEKPVDVTDAQVNEACLAFLGRSKQ
IPSMFSALKHQGKPLYHYARQGIEIEREPRDIEVYELEVLRIELPYVDMRIKCSKGTYIR
SIVDDLGQNLGCGAYVTRLHRTEVADYPTDKMVSLDTLISTQESLAEGDFAALDAFLIPM
DTAVSRLPRVVINDEERSRFDHGQSVKGVCEAELIAGVSYRVYHQQADDCLFLGVGEGVK
DPRDQGQPKNEIFVNPKRRVVYS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgacgtaaaggccgtgatattaacggcatagtattacttgataagccgctg
ggcgggtcatctaaccagctgcttcaaaaggttagatggctgtataaagcggtgaaagca
gggcacaccggggcactagaccctctagctagcggtatgttgccattgtgtctaggcgaa
gcaactaagttttctcagttcctactcgacgccgaaaaaacgtatgaagtcactgctaag
cttggtgttcgcactaccacttcagatgccgatggtgaggttgttgaagaaaagcccgtt
gacgttactgatgcacaggtaaacgaagcttgcctcgcctttttagggagaagtaagcaa
attccttccatgttctcagcgcttaagcatcaaggaaaaccgctttatcactacgcccgc
caaggtatagaaatagagcgagagcctcgcgatatagaagtgtatgagctagaggtttta
cgcatcgaattgccttacgtggatatgcggataaagtgtagcaaaggaacctacatacgt
tctattgttgacgacttaggccaaaacttgggttgcggcgcgtatgtaacacgtctgcat
cgcaccgaggttgcagattatccgacggataaaatggtgtcactagatacccttatcagc
acgcaagaatcacttgctgagggcgattttgcagcgctagacgcttttctcatacctatg
gatacggctgtaagccgcttgcctcgcgtcgtgattaatgatgaagagcgcagtcgcttc
gaccatggacaaagcgttaaaggggtatgtgaagcagagcttatcgctggagtttcctat
cgcgtttatcatcagcaggcagacgactgtttgtttttaggcgtaggtgagggggtaaaa
gacccaagagatcaggggcagccaaagaacgaaatctttgttaatcccaagcgacgcgtg
gtttattcgtaa
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