Alteromonas sp. RW2A1: BM528_15930
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Entry
BM528_15930 CDS
T10273
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
altr Alteromonas sp. RW2A1
Pathway
altr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
altr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BM528_15930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
altr03021
]
BM528_15930
03400 DNA repair and recombination proteins [BR:
altr03400
]
BM528_15930
Enzymes [BR:
altr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BM528_15930
Transcription machinery [BR:
altr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BM528_15930
DNA repair and recombination proteins [BR:
altr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BM528_15930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
APE07080
UniProt:
A0AAC9JKC2
LinkDB
All DBs
Position
complement(3671577..3672566)
Genome browser
AA seq
329 aa
AA seq
DB search
MVGSVTEFLKPRLVEIENVSPTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDVIEILLNLKGLAVRLEGKTEATLTLVKSGAGPVVAGDIQHDGD
VEIVNPDHVICTLTGEAEISMRVKVEMGRGYVPASTRRSSEEDDRPIGRLLVDASYSPVE
RIAYTVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRSATILAEQLDAFVDLRDVSEPE
AKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIAEKD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
attgtgggttctgtgactgaattcctaaaaccgagattagtagagatcgaaaacgtttct
cctactcgtgccaaagtaactttggaaccactagagcgcggctttggccatactctaggt
aacgccctacgtcgtatcttactgtcatctatgccaggatgtgcagttaccgaggtagaa
attgatggcgttcttcacgagtacagcaccaaagaaggtgtgcaagaagacgtgatcgaa
atcttgctcaatcttaaaggtttagcggttcgccttgaaggtaaaactgaggcaacccta
actctagtgaaatctggcgctggccctgttgttgctggtgatattcagcatgatggcgac
gtagaaattgttaaccctgaccatgttatttgtactctaactggcgaagctgaaatcagc
atgcgcgttaaagtagaaatgggtcgcggttatgtaccagcttctacccgtcgctcctct
gaagaagatgatcgtccaattggtcgtttgttagttgatgcttcatacagcccagtagag
cgcattgcatacactgttgagtctgctcgtgttgaacaacgcacagacttagacaaacta
atcatcgatatggaaacaaacggtactttagatcctgaagaagcgatccgccgttctgca
accattctagctgaacagcttgatgcattcgtagacttacgcgatgtatctgagccagaa
gcgaaagaagaaaaaccggagttcgatccgattctacttcgcccagttgatgacttagag
ttaacagtacgttctgctaactgcttaaaagcagaagctatccagtacattggtgacctg
gtacagcgcactgaggttgagctacttaaaacgcctaaccttggtaagaaatcgctaact
gaaatcaaagatgttctagcatctcgtggtttgtctctaggcatgcgcctagaaaactgg
ccgccagagagcatcgctgaaaaagattaa
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