KEGG   Alteromonas sp. RW2A1: BM528_16755
Entry
BM528_16755       CDS       T10273                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
altr  Alteromonas sp. RW2A1
Pathway
altr02024  Quorum sensing
altr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:altr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BM528_16755
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BM528_16755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:altr03019]
    BM528_16755
   03036 Chromosome and associated proteins [BR:altr03036]
    BM528_16755
Messenger RNA biogenesis [BR:altr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BM528_16755
Chromosome and associated proteins [BR:altr03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BM528_16755
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: APE07226
LinkDB
Position
complement(3855843..3856094)
AA seq 83 aa
MAKGQSLQDPFLNALRKERIPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPARAITMPSTTGDSENNKTE
NT seq 252 nt   +upstreamnt  +downstreamnt
atggctaaagggcaatcattacaagacccattcttgaacgctttgcgcaaggaacgtatt
ccagtatctatttatctggtaaacgggattaaacttcagggacaggttgaatcatttgat
cagttcgttattttgttaaaaaacactgttagtcaaatggtttacaaacatgcaatatca
accgttgttccagcacgtgctatcacaatgccaagtacaacaggagattctgaaaataat
aaaactgaataa

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