Alteromonas sp. RW2A1: BM528_17920
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Entry
BM528_17920 CDS
T10273
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
altr Alteromonas sp. RW2A1
Brite
KEGG Orthology (KO) [BR:
altr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
altr02000
]
BM528_17920
Transporters [BR:
altr02000
]
Other transporters
Pores ion channels [TC:
1
]
BM528_17920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
APE07813
LinkDB
All DBs
Position
complement(4117197..4119320)
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AA seq
707 aa
AA seq
DB search
MSLFVLVSVLSLSLISSNALADAKNDDDISSTNGKDSDNVEKIDITYRQLFRGNVKPFEL
PQAITTITGDDAKKLGMTRLQDVLTLDASLTKQNNSGGFWDSFAIRGFAGNENMPAGFMV
NGFSGGRGFSGTFDMSNVESIEVIKGPGSALYGRSEPGGVVNIITKKPQYYESGSISAIY
GSFANQRIEADYTQGINDILAVRINGAFEDNNSYRDTVTRRKTVLSPSFNIDLGDAESLL
YEMQFFKQAQRFDRGIAILNDNFDDIDTSLYLGEPNDGPTTIYALSHQLTYDRQLNSQWA
LLAGLSYRDTRMDGFSSDAELSGARQSVYDDGETLTRQRRKRDYDSSDSALRVELSGDTQ
FAGLSHNLLVGIDAYEYDLSTALFRYRGGKGTYTLNINNPVYGQQQPDVALLYQNIEEQR
GVGLYVQDTIAVANNIDILLGARADYIDQDIFEVNQQTTNRDTETRLSPRLGLIYKVSDN
INVYTSYSEGFLSLSGTDANGEPFGFEESSSVEIGSKFSFNNIVGSVAAFRGRKSNILVA
DPVNVGFSAPLGEAVSKGVEIEFNAQIRDNMSLFVSAAKTQAETENTVVNADWGVEIPQG
SPLVNVPEYTLSTVLTYFTKIAGMDSQIGSSYQYVHEQLGDAADLSFQLPSYQLAGLFAT
LAFTDSLNLQLNVDNLFDETYIESSYHRLWSYPGAPRTINMRVDYAF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgctattcgtattagtatctgtattgtcgctctctcttataagctcaaatgcccta
gccgacgctaaaaacgacgatgatatttcatctactaatgggaaagattctgacaatgtt
gaaaaaattgatatcacctatcgacagctttttaggggcaatgtaaagcctttcgagctg
ccgcaagccataacaacaattaccggtgatgacgctaaaaagctagggatgacgcgatta
caggatgtactgacactagacgcaagccttacaaagcaaaacaacagcggtggattttgg
gatagctttgccattcgcggatttgcaggcaatgaaaatatgccggctggcttcatggtg
aatgggtttagtggaggaagaggcttcagcgggacctttgatatgtctaacgttgagtcc
atagaagtcatcaaggggccaggttcggcgctttacggacgctctgaaccaggtggtgtc
gtaaatataattactaaaaagcctcaatattatgaatcgggtagcatttctgcgatttac
ggtagctttgctaatcagcgaatagaggcagactatactcagggtataaacgatattctg
gctgttcgaataaacggtgctttcgaagacaacaacagctatcgcgatacggttactcgt
cgaaaaacggtgttatccccttcctttaatattgatttaggtgacgcagagtctctgctg
tacgaaatgcagttttttaaacaggctcaacgatttgatcgtggcattgcgatacttaac
gataatttcgatgatatagataccagtctttacttaggtgaacccaatgacgggccaaca
acaatttatgcgctcagccaccagctcacttatgatagacaacttaacagccaatgggca
ttacttgctgggctaagctatcgagatacgcgaatggatggcttttcctcagacgctgaa
ctgtcaggggcgagacagtctgtttacgacgatggtgaaacgctgacaaggcagcgcaga
aagcgagattatgactcttctgatagtgctttacgcgttgagttaagtggagatacccaa
ttcgctggtttatcacataacttacttgttggcattgatgcctatgaatatgacctaagt
actgcgttattccgctaccgcggtggaaaaggcacctatacgcttaatatcaataatccc
gtatatgggcagcaacaacctgacgtagcacttctttaccaaaatattgaagagcagcga
ggcgttggactgtacgttcaagatacgatcgcagttgccaataatatcgatattttactt
ggtgcccgcgcagattatatagaccaggatattttcgaggtaaatcaacaaacaactaat
cgtgatactgaaactcgccttagcccccgcttaggacttatctataaggttagcgacaat
ataaatgtatataccagttattccgaaggctttttgtcgcttagtggcacagatgcgaac
ggtgaaccgtttggatttgaagaaagcagttcagtggaaataggctcaaaattctcgttt
aataatatcgtgggttctgttgccgcttttcggggaagaaagtctaatatattggttgcc
gaccctgtgaatgttgggttttctgctcccttaggagaagccgtgagcaagggcgttgaa
atagaattcaatgctcaaatcagagataatatgtcgctcttcgtttccgccgcgaagacg
caagctgagaccgaaaacacagttgttaatgctgactggggcgtagaaataccgcagggc
agcccattggttaatgtgcccgaatacacactgtctactgtgctaacctactttactaaa
atagcaggcatggactcgcaaattggaagctcttatcaatatgtacatgaacagcttgga
gatgctgcagatttatcttttcaacttccctcttatcagcttgcagggctatttgcgact
ttagctttcaccgactcgttgaatttacaacttaacgtagacaacttgtttgatgaaact
tatatcgaaagtagttatcaccgtttgtggtcttaccctggtgcgcctagaacaataaat
atgcgggtcgattatgcattctaa
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