Alteromonas sp. 4B03: VYL94_09340
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Entry
VYL94_09340 CDS
T11566
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
Organism
alts Alteromonas sp. 4B03
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
BLOC1_2
CCDC39
Motif
Other DBs
NCBI-ProteinID:
XTV65822
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Position
2145947..2149486
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AA seq
1179 aa
AA seq
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MRLKKIKLAGFKSFVEPTTIPFPAEMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA
MTDVIFNGSSSRKPVGQCSVELVFDNSAGRIVGEFANYNELSVKRLVTRDATSTYFLNGT
RCRRRDVTDLFLGTGLGPRSYAIIEQGMISRLIESKPQDLRVFIEEAAGISKYKERRRET
ENRIRHTQDNLERLNDVRDELGKQLEKLQRQAAAATRYKTLRAQARELKGQLAALRFLKN
SEHIEALQKQQQALQLEVDDLVARLQGDEAGLESYKTKQVETKHTIDDLQQQLFTTSNAI
TRLEQNALHAKQRKVQVEQELARINEQHELLNHSIDEAQEALAVSNEALESIEPEFVLKE
AELEHAKERFEDAEQALREFNVKAREQEQTYNQLRQNVQQCHSQIQSTMSMQLRTSQRIS
ELQDELKQLDEEDYTSQVALLEEQCSELDFDIDEVKQSLQIASEQVQKQHADVNAIEAKR
RDAQGQLQTALSTKAALEALQQDASSFEDVLLEGLEKLWQQFSSNQALAPCIESILQHAK
DPVVAKSCSIQTLLQTKESLPSGIKVFTDEAFVTAARAGSLAHALLAESSNSGPSTQRVP
AFFNDIYLCRDDEELAKTIVSSFKSAFADESEPEGIAHGFSSAISPSGLWASEQWVVKPG
EANDGALQRANKIKTLKDSIEETESLLVDITHSFEHAEQELEHSEVHRHSITNALGEKES
QRTQLKNKLSLLEMQRQQQSARTSKLNDELVKQDTMLAKEDEQLAQLSEKLELQEAQILE
HEVHVDDVNAKREANERATSELRALVDTLTTQNHELALKKQQLENHQNLYSQQVTRNLQQ
REEYIKNKERLQQELVQLTSPEEIQEAELQSLLENKAELEQLKSAKQSSLEDIEQWLREA
EKGHQALGKDIQTRQTNIDKLNIDIEGYRVRANTILEQLDETQQSLKSILETLPEDADEK
RWQEDLEKTQANLQRLGAVNLAAVEEYETQSQRKSHLDTQHNDLTEALETLQSAIRKIDK
ETRTRFSNTFEQVNDDLKTLFPKVFGGGSAYLALTDDDLLETGVTIMARPPGKKNSTIHL
LSGGEKALTALSLVFAIFRLNPAPFCLLDEVDAPLDDANVGRFCNLVSEMSQTVQFIYIT
HNKIAMEMASHLTGVTMAEPGVSRMVAVDVDEAVAFAEA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcttaagaagatcaagctcgcgggttttaagtcctttgttgagccaaccacaatc
ccgtttcccgcagaaatgaccgccattgttggcccaaatggctgtggcaaatcgaatgtt
atcgacgctgttcgctgggttttaggtgaaagttcagccaaaaacttgcgcggtgatgct
atgactgacgtgatttttaatggctcttcctcgcgtaagcctgtgggacaatgtagcgta
gaacttgttttcgataacagtgcagggcgaatagtaggtgaatttgcaaactataatgag
ctgtccgttaaacgcttagttacacgagatgctacttcaacctattttctcaacggcacc
agatgccgcagacgcgacgtaaccgatctctttttaggaacagggctagggccgcgctct
tacgctattattgaacaaggaatgatatcacggcttattgaatcaaaacctcaagacctg
cgtgtatttattgaagaagccgcgggtatttcaaagtataaagaacgccgtagagaaaca
gaaaatcgtattaggcatacgcaagataaccttgaacgcttaaacgatgtgcgtgatgaa
ctgggaaagcaactcgaaaaattacagcgtcaagctgcagcagctacccgctataaaacg
cttcgcgcacaagccagagagttgaaaggtcagctagcagcccttcgttttctgaaaaat
agtgaacatattgaagcgctgcaaaagcagcagcaagcattgcaactagaagttgatgat
ttggtcgctcggctacaaggtgacgaagcaggacttgagtcgtataaaaccaagcaagtt
gagacaaagcacactatagacgacctacaacagcagttgttcactaccagtaatgcgatc
acgcgattagagcaaaatgctctgcatgcgaaacaacgtaaagtacaagtagagcaagaa
ttagcgagaattaacgaacaacatgaactgcttaatcattctattgatgaggcacaggaa
gcgcttgcagtgtcaaatgaggcacttgaaagcattgagcccgagtttgtattaaaagaa
gctgaattagaacacgcaaaagagcgctttgaagacgctgagcaggccttaagagagttc
aacgtaaaagcacgtgagcaagagcagacgtacaatcaacttcgtcaaaatgtgcagcag
tgccatagccaaattcagtctacaatgagcatgcagcttcgtacttcccagcgcattagc
gaactgcaagacgagttaaaacaattagatgaagaagactacaccagccaagttgcgctt
ttagaagagcaatgtagcgagcttgattttgacattgatgaagtaaagcagtcacttcaa
atagccagcgagcaagtgcaaaagcaacacgcagatgtaaacgcgatcgaggcgaagcgc
cgtgatgcgcagggccagttacaaactgcactttccacaaaagctgcactagaagcgctt
cagcaagacgcctcaagctttgaagatgtgttgttagagggtttagaaaaactgtggcag
cagtttagttctaaccaagcacttgcgccgtgtattgagtctattttgcaacacgctaaa
gaccctgtggtcgctaaaagttgctctatacaaactctacttcaaaccaaagaaagtcta
ccaagtggtataaaagtattcaccgacgaggcgtttgtaaccgcggccagagccggttcc
ttagcgcatgcattgttagctgaatctagtaacagtggtccttcaacgcagcgtgtcccc
gcattctttaatgacatttacctttgtcgcgacgatgaagaacttgcgaaaacgattgta
agtagctttaaaagtgcctttgcagatgagagcgaacctgaaggcatagctcatgggttt
agtagcgcgatttcgccctcagggctttgggcaagcgaacaatgggtcgtcaaacctggt
gaggcgaacgacggtgctttgcagcgtgccaataaaattaaaacattgaaagatagcatc
gaagaaacagaaagccttctagttgatattacgcattcgttcgagcatgctgaacaggaa
cttgaacacagtgaggttcataggcattcaattacgaatgccttaggagagaaagagagt
cagcgcacacaacttaaaaacaaactttctttgcttgaaatgcaacggcagcagcagtct
gcacgtacttcaaaactgaacgatgagttagtaaagcaagacacaatgctagcgaaagaa
gatgagcagttagcccaactttcagaaaaattagagcttcaagaagcgcagattttagaa
cacgaagtacacgttgacgatgttaacgctaagcgtgaagcgaatgagcgagctacatca
gaattgcgcgcgttagtcgatacattaacaactcaaaatcatgaacttgcacttaaaaag
cagcagcttgaaaatcatcaaaatttatatagccagcaggttacgcgtaacctgcagcag
cgtgaagaatacataaagaacaaagaaagactgcaacaagagcttgtacagttaacgtct
cctgaagaaattcaagaagcagaactccagtcgctgttggaaaacaaagcggaacttgag
caattaaaaagtgcgaagcaaagtagtcttgaagatatagaacaatggttacgagaagct
gaaaaagggcatcaggcactgggtaaagacattcaaacccgacaaacaaatatcgataag
ctcaacattgatattgaagggtatcgggtacgtgcgaatacgattttagagcagcttgat
gaaacgcaacagtcgctcaagagtattttagaaaccttacccgaagatgccgatgaaaag
cgctggcaagaagaccttgaaaaaacacaggctaatttgcagcgtttaggggcggtaaac
ttagctgcggttgaagaatatgaaacccagtcacaaagaaagtcacatttagatacacag
cacaacgaccttaccgaagcattggaaacactgcaatctgccattcgcaagattgacaaa
gaaacgcgtacgcgcttttcgaataccttcgagcaggttaatgatgaccttaaaacgtta
ttccctaaggtcttcggcggggggtcggcataccttgcgcttaccgatgacgacttatta
gaaacaggggtgacgataatggctcgcccacctggtaagaaaaatagtactattcacctc
ttaagcggtggagaaaaagcattaaccgctttatcattggtgtttgctattttcagatta
aatccggcgccattttgtctgctggatgaagtagatgcaccattggatgatgcaaatgta
gggcgcttttgtaacttagtgtcagaaatgtcacaaacagtgcagtttatttatatcacc
cacaataaaatagcgatggaaatggccagtcacctaaccggtgttactatggcggaacct
ggagtttcgcgtatggtagcggtagatgttgacgaggctgtagccttcgcagaagcataa
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