Alteromonas sp. 4B03: VYL94_18510
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Entry
VYL94_18510 CDS
T11566
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
Organism
alts Alteromonas sp. 4B03
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_assoc
WHD_Lhr
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XTV63760
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Position
complement(4311086..4313584)
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AA seq
832 aa
AA seq
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MTLLPPAFAKWFTQKGWQLRDYQHTMLVEKDKHDCTLLIAPTGAGKTLSGFLPSLVELSD
LNENNTSAESKSKQSGFTGLHTLYISPLKALTQDIHRNLLQPIEEMALPITAETRTGDTP
SHKRQRQRKKPPNILLTTPESLMLMLSYADADKLFGKLKRVIIDETHSLMANKRGDFLSL
ALARLSVLSPSCKRIGLSATVAFPETLGAWLAGSDSVANIIKVKAGEKPKVEMLHSKARM
PFGGFMARYAIDDIYEAIENAQTTLVFVNTRAQSELLFQMLWEANKAALPIALYHGSLSK
EQRRKTEAMMASGMLRAIVCTSALELGIDWGDVDKVIQVGAPKGVSRLLQRIGRANHRLD
EPSEALLVPANRFEALECQAAITAIEKGELDGESPQPGALDIIPQFILNCLCSKADSPDA
LYQEILTATPYQGLDKDDFDKLWRFTQDGGSALNAYERYQRLTQNDDGTFAPANQRVIQR
HRQNIGTIVEAGRLKVKRIRRGNQGKIIGEVEEYFAQQLTPGDTFYFGGETLRFEAIRDM
QLHAKSAKAKEPKIPSYAGGQMPLSTYLAEGVRAILASQKTWKALPAQVQEWLKLQQAFS
QLPSPEKVLVEQFPFRQAHYTLYYTFDGRKANQTLGMLLTRRMEKMGIKPLSFSVTDYGL
SVASVNAITQGQLQQLFQPDILGDELEDWMLQAPMLKRSFRQVAVVSGLTEQRYHASQKT
MKQVTFSTDLIYDTLREHDRDHILLKVARADAERELLDLRRLANLLIRYVDSATLVNLEK
PSPMAIPIVLDVRSEQVKGAGAQAIIEQADLYAEAETMLDEVRALLSGTSVE
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgacattactacctcccgctttcgctaagtggtttacgcaaaaaggctggcaactacgt
gattatcagcacactatgttggtggaaaaagataaacatgactgtacgttacttatagcg
ccaacaggggcgggtaaaactctgtcaggttttctgccgagtttggtagagcttagtgac
ctaaacgagaataatacgtcggctgaaagcaagagtaagcagagtgggtttactggtttg
cataccttgtacatttctccacttaaagcgttaacccaagatattcatcgcaacctgtta
cagcctatcgaggaaatggcactgcctatcactgcggaaacccgtactggtgatacgcct
tctcataagcgtcagcgacagcgtaaaaagccgcctaatattctacttactaccccggaa
tccctcatgctgatgttaagttacgccgatgccgataagcttttcggcaagctaaaacgc
gtgatcatcgatgaaactcacagtttaatggctaataagcgcggcgactttttatcactc
gccctagcacggttaagcgtgctttcaccaagctgtaaacgcataggtttgtcagcgaca
gtagcatttcccgagactttgggcgcgtggctagcgggcagtgacagtgttgccaatatc
atcaaagtaaaagcgggagaaaagccaaaagttgaaatgctgcactctaaagcgcgcatg
ccttttggcggctttatggcccgttacgccattgatgatatctatgaggcgatagaaaat
gcgcagaccacgctggtttttgtcaatacccgtgctcagtccgagcttctatttcaaatg
ctgtgggaagcaaacaaggctgcgctcccgattgcactttatcacggcagtttaagcaaa
gagcaaaggcgaaaaaccgaagccatgatggcaagtggtatgctaagagcaattgtgtgt
acttctgcgttagaactaggtatcgactggggcgatgtagataaggtcattcaagtaggt
gcgcctaaaggggtaagcaggctgctgcaaaggatagggcgagcgaaccacaggttagat
gagcctagcgaagcgttacttgtaccagcaaaccgttttgaagcgctagaatgccaagcg
gccattacggctattgaaaaaggtgaacttgatggcgaaagccctcagccaggcgcccta
gatatcattccgcagtttatcttgaactgtttatgtagcaaagctgatagcccagatgcc
ttgtatcaagagatacttaccgctacgccttatcaagggttagacaaagacgatttcgac
aagctgtggcgctttacgcaagacggaggcagtgcccttaatgcgtatgaacgatatcag
cgtttaacgcaaaacgacgatggcacttttgcgcctgcaaatcagcgagttatacaaaga
cacaggcaaaacataggcacaatcgttgaggcagggcgtttaaaggtaaagcgcattaga
aggggaaaccaaggcaagatcattggcgaggtagaagagtacttcgcccagcagttaacg
cctggagataccttttatttcggcggagaaacactgcgctttgaagctatccgcgacatg
cagcttcacgccaagtcggcaaaagccaaagagcctaaaataccaagctacgcaggcggt
caaatgccgctatctacctatctagcagaaggggtacgggctatcttggccagtcaaaaa
acctggaaggcactgcccgcacaggtacaagagtggctgaagcttcagcaggcgttctct
cagctacctagccctgaaaaggtgctggtggagcagtttccatttaggcaggcgcattat
accttgtactacaccttcgacggacgcaaagcgaaccaaaccttaggtatgttattaaca
cggcgaatggaaaaaatgggcattaagcctttaagcttcagcgtgactgattatggttta
tcggtagcatcagtgaacgccatcacccaagggcaattacagcagctgtttcagccggat
attctaggcgacgagttagaagattggatgttacaagcgccaatgctaaagcgttcgttc
agacaagtagcggtggtgagtgggcttactgaacagcgttatcacgccagtcaaaaaacc
atgaagcaagtaacgttttctaccgaccttatttacgatacattgcgagagcacgaccgg
gaccatatattacttaaagtagcgcgtgctgatgctgagcgtgaactactagacttacgg
cggctcgctaacttactgattcgctatgtagattcagcaacattagtgaaccttgaaaaa
ccctctcccatggccatacctattgtgcttgatgtacgcagtgagcaagtaaaaggcgct
ggggcacaggccatcatcgagcaggctgatttgtatgcggaagctgaaaccatgttagat
gaagttcgcgcactactctcagggactagcgttgaatag
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