Alteromonas sp. OM2203: ACM0P2_00940
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Entry
ACM0P2_00940 CDS
T11346
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
altz Alteromonas sp. OM2203
Pathway
altz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
altz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACM0P2_00940 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
altz03019
]
ACM0P2_00940 (recQ)
03400 DNA repair and recombination proteins [BR:
altz03400
]
ACM0P2_00940 (recQ)
Enzymes [BR:
altz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACM0P2_00940 (recQ)
Messenger RNA biogenesis [BR:
altz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACM0P2_00940 (recQ)
DNA repair and recombination proteins [BR:
altz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACM0P2_00940 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
CRS1_YhbY
T4SS-DNA_transf
PB4_spike
Motif
Other DBs
NCBI-ProteinID:
XPP51966
LinkDB
All DBs
Position
complement(208135..209976)
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AA seq
613 aa
AA seq
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MTTAIASLESEPQSRSAKTPETILKDVFGYDAFRDGQGEVIHQVCEGKDALVLLPTGGGK
SLCYQIPALVRSGTAIVVSPLISLMQDQVEQLKALGVKAAYLNSTLDIDEQGRINDALQA
GKLDLLYVSPERLMQYYFQQSLSHADISLFAIDEAHCVSHWGHDFRQDYRALGQIKSRFP
HIPVIGLTATADTATQADILTQLNLQDPLVYKGSFDRPNIRYRVMSKYKAFDQVVAYVKQ
QEGSGIIYCNSRAKVDDLHAKLFRQGFRCAAYHAGMDSDERELVQRQFLNDKVDIVVATV
AFGMGINKSNVRYVVHHDVPRSVESYYQETGRAGRDGLASEALLLFDEKDAARVKQWIEQ
GEIAERNQIELQKFAAMEAFSEAQTCRRQVLLNYFSQFSDSACGNCDICLDPPKMIDGLV
IAQKVLSCVLRLSQQAASQYVIDVLRGKQLRRLQEAGHHQLSTYGIGKDKSDSYWHNIIN
QLVHKGLIRVDITAHAALRLTEAARPVLKGEVAVQLAVPRLEFKPDKQKAKQAPANYDRT
LFTRLKHLRKVLAEENEVPPYVVFSDATLVDMACKLPTTRNTLLDVSGVGQTKLERYGDA
FIQLIDGYINREH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactactgcaatagcttcattagaatccgagcctcaatcgcgaagcgcaaaaacacct
gaaactatcttaaaagatgtcttcggttacgacgcatttcgcgacggtcagggcgaagtc
attcaccaagtatgtgaaggtaaagacgcacttgtactactgcccacaggcggtggtaag
tctctgtgctatcagattcctgctctggtgcgaagcggcacggccattgttgtttctccc
ctaatttccttaatgcaagatcaggtagaacaacttaaagccttaggtgtaaaggcggca
tatctcaattctacactagacattgatgagcaagggcgcatcaacgatgcattacaagcc
ggtaaacttgacctgctttacgtctcacctgagcggctcatgcaatattactttcagcag
tcactttcacacgctgacattagcctatttgccattgatgaagcacactgtgtgtcgcac
tggggccatgactttaggcaagattaccgcgcgctaggtcaaataaagtctcgctttcct
catatcccagttatcgggctaaccgccacagcagacactgcaactcaagcagacatactt
acccaactgaacctgcaagacccgttggtttataagggaagctttgacaggcccaacatt
cgctaccgcgttatgagtaagtataaagctttcgaccaggtggttgcgtatgtaaaacag
caagaaggcagcggcataatttattgtaatagccgtgctaaagtagacgacctacatgca
aagctgttcagacaaggctttcgctgtgcggcctatcacgcaggcatggacagtgatgag
cgagagttggttcagcgccaatttctcaacgacaaggtcgacattgtggtggctaccgtc
gccttcggaatgggcatcaataaatcaaacgttcgctacgttgttcaccacgatgtgccc
cgcagtgtggaaagttattatcaagaaacaggccgtgctgggcgagacggcttggcgtct
gaagcgctactattgtttgatgaaaaagatgcagctcgcgtaaagcaatggattgaacaa
ggcgagattgccgagcgaaatcaaatcgagctacaaaagtttgctgccatggaggcattt
tcagaggcacaaacgtgtcgtcgtcaagtattgctcaactatttttcgcagttcagcgat
agcgcctgcggtaactgtgatatttgcctcgacccgccgaaaatgattgacggtttagtg
attgcgcaaaaagtattgtcctgtgtacttcggctttctcaacaagctgctagccaatat
gttatcgatgtattgcgaggaaagcagttgcgacgcctacaagaggcaggtcatcatcag
ctttccacctacggcataggcaaagataagtctgatagctactggcacaatattatcaat
cagttggtacacaaggggcttattcgtgtggacatcacagcacacgcggcattgcgtcta
actgaagctgcccgcccggtgctaaaaggcgaagttgctgttcaacttgctgtacctcgg
ttggagttcaagcctgataagcaaaaagccaagcaggctccagctaattacgacagaaca
ttattcactcgccttaagcatttgcgaaaagttcttgcagaagaaaacgaggtgccgccc
tacgtcgtgtttagcgacgccaccctcgttgatatggcttgcaagctccccaccacacgc
aacacattgctagacgtgagcggcgtaggtcaaaccaagctagagcggtatggcgacgcg
tttattcagttaattgatggttatattaaccgagagcattag
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