Alteromonas sp. OM2203: ACM0P2_03415
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Entry
ACM0P2_03415 CDS
T11346
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
altz Alteromonas sp. OM2203
Brite
KEGG Orthology (KO) [BR:
altz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
altz03009
]
ACM0P2_03415 (rlmD)
Enzymes [BR:
altz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ACM0P2_03415 (rlmD)
Ribosome biogenesis [BR:
altz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACM0P2_03415 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
RrnaAD
Methyltransf_25
TRM5-TYW2_MTfase
Methyltr_RsmB-F
Methyltransf_11
Methyltransf_15
TRAM
MTS
PCMT
Motif
Other DBs
NCBI-ProteinID:
XPP52431
LinkDB
All DBs
Position
774959..776419
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AA seq
486 aa
AA seq
DB search
MANLFKQSRSKQKDKASRTQSSASKRGSVSANAQVAGLRFGKDKKTTNISASQAIDTVTI
DDLDWMGNGVARGNPMVFVEGALVGETCDIEALSSKKKVINAKAKKIHAPSEVRQVPFCP
VFDACGGCQLQHIKPDAALAQRDLALKVMMERHLAMKPHVWQASLEGPRPQYRRKARLAI
DARNPNLIKLGFREANSNNVINVETCPILVDPLSTIIGPLRDALTGFESARHIGHVSLVA
GDNTSHLVIKHTKALEAELIDAVSALVSENFSVSDHDIEFKLENKQGQIRSVGKHTDIVM
NTVNGCSISPSANDFIQINKVVNEKMINQAIDWLSPQPDERVADWFSGLGNFTLPIAKRG
AKVQAIEGVAEMVRRAKDNAQQQGIENVEWLHLDLADKTNVEASLQQGVDKVLLDPSREG
ALTVCHALVKALPKTIVYVSCNPSTFTRDAKVLIDGGYEMEKAGVAEMFPFTHHMEMMAL
FTRKQQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaccttttcaaacagtcgcgcagtaagcaaaaagataaagcgtctcgtactcaa
agcagtgcttcaaaaagaggaagtgttagtgcaaatgcgcaggtcgctggtctgcggttt
gggaaggataaaaaaacaacaaatatcagcgcaagccaagcaatagatacggtaaccatt
gatgatttagattggatgggtaatggcgtggcgcgcggtaatcccatggtgtttgtggaa
ggcgcccttgtaggagaaacctgcgatatagaggcgttatctagtaaaaagaaagtcata
aacgccaaagcgaaaaaaatccacgcgccaagtgaagtaagacaagtacctttttgccct
gtgtttgatgcatgcggcgggtgccagctacagcacataaaacccgacgctgcccttgcg
caacgtgaccttgcccttaaagtgatgatggagcgtcaccttgcaatgaagccacacgtt
tggcaagcatctctagaggggcctcgccctcaatatcgcaggaaagcaaggctggccata
gatgcccgtaaccctaatctaattaagttgggcttccgcgaagcgaatagcaataatgtt
atcaatgtagaaacatgccctatattggttgacccgctatctacaattattggtccgttg
cgagacgcgttgacagggtttgagtctgctcgtcatattgggcatgttagccttgttgca
ggtgataatacctcacaccttgttattaaacacaccaaagcccttgaggctgagctgatt
gatgcggtgagcgcattggtgagcgaaaatttctctgttagcgaccatgatatcgaattc
aaacttgagaataagcaagggcaaattcgcagtgtaggtaagcatactgatattgttatg
aatacggtaaatggttgctcaatttcccccagtgctaacgactttattcaaataaataaa
gtggttaatgaaaaaatgattaaccaagcaatagactggctaagtcctcagcccgacgag
cgtgtagctgattggtttagcgggctgggtaattttactttgcccattgctaagcgaggt
gcaaaggttcaagcgatagagggtgtggccgagatggtgcgccgagctaaagacaatgca
cagcagcagggcattgaaaatgttgagtggctgcatttagatttagccgataagaccaac
gtcgaggcttcattgcaacaaggcgttgataaggtattgctagacccctcacgagaaggg
gcgttgactgtttgtcacgcgcttgtaaaagcactaccaaaaacgatagtgtatgtttct
tgcaatccaagtacgtttacaagagatgcaaaggtgttgatagacggaggttatgaaatg
gaaaaagcgggcgtagcagaaatgttccccttcacccatcacatggaaatgatggccttg
tttacgcgtaagcagcagtaa
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