Alteromonas sp. OM2203: ACM0P2_04870
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Entry
ACM0P2_04870 CDS
T11346
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
altz Alteromonas sp. OM2203
Pathway
altz03030
DNA replication
altz03430
Mismatch repair
altz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
altz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACM0P2_04870 (dnaE)
03430 Mismatch repair
ACM0P2_04870 (dnaE)
03440 Homologous recombination
ACM0P2_04870 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
altz03032
]
ACM0P2_04870 (dnaE)
03400 DNA repair and recombination proteins [BR:
altz03400
]
ACM0P2_04870 (dnaE)
Enzymes [BR:
altz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACM0P2_04870 (dnaE)
DNA replication proteins [BR:
altz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACM0P2_04870 (dnaE)
DNA repair and recombination proteins [BR:
altz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACM0P2_04870 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XPP52707
LinkDB
All DBs
Position
1076742..1080206
Genome browser
AA seq
1154 aa
AA seq
DB search
MSSPFIHLRVHSDYSMMDGLNKVKPILGKVAELEMPAVAITDQMNMCGLVKFYSEAHNLG
IKPIIGTDFWVTNETFGDEPFRLTLLAMNNEGYKNITVLISKAYLRGHLAHRAVIDQEWL
IEHSEGVIILSGAQHGDVGVGLTKNNPKLLDSAVDFYQTHFPDRFYLELIRTGRQGEEDY
LHRAVELAEQRGMPVVATNEVCFIDQEGFDAHEIRVCIHDGYTLDDNRRPKRYSDQQYLR
TSEEMVELFADIPEAIENTVEIAKRCNVTVRLNEYFLPQFPTGGMTTEDFLVKVSEEGLE
ERLVFLFPDEEERKAKRPEYDDRLRIELEVINQMGFPGYFLIVMEFIQWSKDNGIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAEL
YGRQAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFKAEPQL
PEVYESDEEVKDLIDMARILEGVTRNAGKHAGGVVIAPTTITDFSPLYCDDEGKNPVTQF
DKNDVETAGLVKFDFLGLRTLTIIQWAIDMIKEGKNVDVDISAIPLEDPKSFRTLQNAET
TAVFQLESRGMKELIKRLKPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEISYPD
AEYQHECLQEILEPTYGIILYQEQVMQIAQEMAGYSLGGADLLRRAMGKKKPEEMAKQRG
TFAEGAKGNNIDPDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKVHYPAEFMAA
VMSADMDNTDKIVTLVDECERMGIEILPPDLNAGKYKFTVDSEGRIVYGIGAIKGVGEGP
IEAIIEARETQGAFKDLFDFCAKVDIKRVNKRVLEKLVLAGAMDNLGPHRATLMATLPDA
LAAAGQHAKAESFGQSDMFGLLTTEPDEVKQAFADVPQWPEKVWLEGEKDTLGLYLTGHP
INQYAEELRYYTDGRLVDLKPTNKDQMASAVGLVLGVRVMTNKRGRRWAIVTLDDKSARI
DVRFFPDMYEQFESVLETDRILLIKGQVSFDDFSGGNTITARDVMDIVQAREKNARALAL
NIDTQLLEPKKMSQMQSILQAFNGGSCPVQLAVTHPDAEVTLACGARWYVTPEDQLLHDL
KQCLGDKAVSILYH
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgccatttattcatttacgtgttcacagcgattattcgatgatggacggctta
aataaagttaagcctatattggggaaggttgccgagcttgagatgcccgcggtggcgata
accgaccaaatgaatatgtgtggcttggtaaagttttactccgaagcacataacctaggc
attaagccgatcattggtacagatttttgggtaactaacgaaacgtttggcgatgagcca
ttcagactcaccttattggcaatgaataacgaagggtataagaatatcacggttcttata
tctaaagcctatcttcgggggcatttggctcatcgcgcggtgattgatcaagagtggctt
attgagcatagcgaaggggttattatcctctccggtgctcagcatggcgatgtgggcgta
ggtttaacgaaaaacaatcccaagcttttagacagcgctgtcgatttctatcaaactcac
tttcctgatcgcttttatttagaacttattcgaacaggtaggcagggtgaagaagattat
ttgcaccgtgcggtagagcttgctgagcagcgcggtatgcctgtcgttgccactaatgaa
gtgtgctttattgaccaagaaggctttgacgcacatgaaattcgtgtgtgtatccatgac
ggttatacgttagatgataatcgccgccctaagcgctatagcgaccagcagtaccttcgc
acaagtgaagaaatggttgagctatttgccgatattccagaagccattgaaaacacggtt
gagattgctaaacgctgtaatgtcacggttcgcttaaacgagtatttcttacctcagttt
ccaacaggtggcatgaccaccgaagacttcttggttaaggtgtctgaagaagggctcgaa
gaacggttagtgtttctttttcctgatgaagaagagcgcaaagccaagcgccctgagtac
gatgacagacttcgcattgagctagaagttatcaaccaaatgggtttcccaggctacttc
cttatcgttatggagttcattcagtggagtaaagataacggtattccggtagggcctggg
cgtggttccggtgcgggttcactggtagcttatgcccttaaaattaccgacctagacccg
cttgaattcgacttgctattcgaacgtttcttgaacccagagcgtgtatctatgcccgac
ttcgacgtcgacttctgtatggatagacgagacgaggtaatcgaccacgttgctgaactt
tacgggcgtcaggcggtatcgcagattattacattcggtacaatggcggcaaaagcggtt
gtgcgcgacgtaggccgtgtacttggtcatccttatggttttgtagatagaatttcaaag
cttattccaccagatccgggcatgacgcttgaaaaggcgtttaaagctgagccacaacta
ccagaagtttatgaaagtgatgaggaagttaaagacctcattgatatggcccgtattctt
gaaggggtaacccgtaatgcgggtaaacacgccggtggcgttgttattgcgccaacgaca
atcacagatttttcgccgctatattgtgacgatgaaggtaagaacccagtaacccaattc
gacaaaaacgacgttgaaacagcagggcttgttaaattcgacttcttgggtcttcgtacg
ctgacgatcattcagtgggcaatagatatgatcaaggaaggcaagaatgttgatgtagat
atcagcgctattccccttgaagatcctaagagttttcgaactcttcaaaacgccgagaca
acggcggtattccagcttgaatctcgaggcatgaaagagctgatcaagcgccttaagccg
gactgttttgaagatatcatcgcattggtagccctattccgtcctggaccgcttcaatca
ggcatggtagataactttattgaccgtaagcatggtcgtgaagaaatatcttaccccgat
gcggaatatcaacacgagtgtcttcaagaaattcttgagcccacctatggcattatcttg
tatcaggaacaggtaatgcaaatagcccaggaaatggcgggctattcactgggcggtgct
gacttgctgcgccgtgcaatgggtaagaaaaagccggaagagatggctaagcagcgcggt
acctttgctgaaggcgccaagggcaataacattgaccctgatcttgcgatgaaaatcttc
gacttggtagaaaagttcgcgggttacggctttaacaaatctcactctgctgcttatgcg
ttggtgtcttaccaaaccctttggctgaaagtgcattatcctgcggaattcatggctgcg
gtaatgtcggcggatatggataacaccgataaaatcgtgacgcttgtggatgaatgcgag
cgcatgggcattgaaatactgccgccagatttgaacgcgggtaaatacaaatttaccgtc
gatagcgaaggccgcattgtctacggtattggtgcaattaaaggggtaggtgaaggtcct
attgaagccattatcgaagcgcgcgaaacccagggtgcatttaaagatctttttgatttt
tgtgcgaaggttgatattaagcgcgttaataaacgggtgttagaaaagttagtgcttgca
ggcgctatggacaacttaggtccacatcgcgctacattgatggctactttacctgatgcc
cttgccgccgcgggacagcatgctaaggcggagtcgtttggtcaatcagacatgtttggg
cttttaactactgaacccgacgaggttaaacaagcctttgcagatgtaccgcagtggcca
gaaaaagtgtggctagaaggtgaaaaagataccttagggctctacttgacgggccacccc
ataaatcagtatgcggaagaattacgttattacaccgatggtcgcttagttgatttaaaa
ccgactaataaagatcaaatggctagcgcggttggtttagtacttggcgttcgtgttatg
acgaacaaacgagggcgtcgttgggcgatagtgacacttgatgataagagtgccagaata
gatgtacgtttcttccccgatatgtacgaacagttcgaaagcgtgttagaaactgacaga
atattgctaataaagggacaggtcagctttgatgatttctctgggggcaatacaatcacc
gcccgtgatgtaatggacattgttcaagcacgagagaaaaacgcgagagcactggcgctt
aatattgatacccagttgcttgaaccaaagaaaatgagtcagatgcaatctatcctgcag
gcatttaatggtggaagttgtcctgttcagttagcggtaacccatccggacgctgaagtt
accttggcgtgtggtgcaagatggtacgttacccctgaagaccaacttttacacgatctc
aaacaatgtttgggagacaaagccgtatcaattctctaccattaa
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