KEGG   Alteromonas sp. OM2203: ACM0P2_05355
Entry
ACM0P2_05355      CDS       T11346                                 
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
altz  Alteromonas sp. OM2203
Pathway
altz02020  Two-component system
altz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:altz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ACM0P2_05355
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ACM0P2_05355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:altz03021]
    ACM0P2_05355
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:altz02035]
    ACM0P2_05355
Transcription machinery [BR:altz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ACM0P2_05355
Bacterial motility proteins [BR:altz02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    ACM0P2_05355
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_10 HTH_23 GerE CT_C_D HTH_38
Other DBs
NCBI-ProteinID: XPP52798
LinkDB
Position
1204171..1204902
AA seq 243 aa
MNSKAAAYQQQTDKSQLVERHAPLVKRIAHHLMARLPASVLVDDLIQSGMIGLLEAARNF
DGSKGASFETFAGIRIRGAMLDEIRKGDWTPRSVHRNGRAISEAISQVEGETGRDARDSD
IAEKLNVSLQDYHQMLNEVNAGKLVGIEDLGVSEDVITTEQSRGSDAPLEDLMQGAFQKA
LAQAITTLPEREAIVLSLYYDEELNLREIGEVLDVSESRVSQIHSQAMLKLKSRMKSWQA
DEE
NT seq 732 nt   +upstreamnt  +downstreamnt
ttgaacagcaaggcagccgcttatcaacaacaaaccgataagtcgcagttagtcgaaaga
catgcgccattggttaagcgtatagcgcatcacttgatggctaggttgcctgcaagtgtt
cttgttgatgaccttatccaatcaggcatgattgggcttttggaagctgcacgaaatttt
gatggctctaagggagctagctttgaaacctttgcaggcatccgtattcgcggtgcaatg
ctagacgaaatacgcaaaggagactggacccctcgttcagtccatcgtaacggacgtgct
atttcggaagctatatcccaagtagaaggtgagaccggaagggatgcaagagattctgat
attgctgaaaagcttaacgtaagcttgcaggattatcaccaaatgctcaatgaagtaaat
gccggcaaacttgtcggaatagaagatttgggtgtgtcggaggacgtaatcacgactgag
cagagtagaggcagtgatgcgccgctggaagacttgatgcagggcgcttttcaaaaagca
cttgcccaagcgattacaacgctacctgaacgggaagcgattgtgctttctttgtactat
gatgaagaattgaatttacgagaaattggtgaggttcttgatgtaagtgagtcaagagtc
agtcaaattcacagtcaggccatgttaaaactcaaatcacgaatgaagtcgtggcaggct
gacgaagaatag

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