Alteromonas sp. OM2203: ACM0P2_11855
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Entry
ACM0P2_11855 CDS
T11346
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
altz Alteromonas sp. OM2203
Pathway
altz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
altz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACM0P2_11855 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altz03400
]
ACM0P2_11855 (recD)
Enzymes [BR:
altz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACM0P2_11855 (recD)
DNA repair and recombination proteins [BR:
altz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACM0P2_11855 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
AAA_22
SLFN-g3_helicase
UvrD-helicase
SH3_13
ResIII
UvrD_C
PhoH
DEAD
CSDE1
RecD_N
nSTAND3
AAA_16
NPHP3_N
Terminase_6N
TrwB_AAD_bind
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
XPP50247
LinkDB
All DBs
Position
complement(2644740..2646887)
Genome browser
AA seq
715 aa
AA seq
DB search
MNNYQQCVSSFFDNLFGIEAIDKFVAKEFGFVEPLSESDALIWAGLLVHLSYMQRNGHSC
VYLKDVAGTTLFKEVAPSAASSIAEQPSGDVLQTDEIHASGREEKALKTGFVLPELTPLL
KIVKSALKNEQVAQLFVYDNGKLYSRRYYEFEQEVARNVVMRAALEPLTEEASEKVKQLW
PAIFPTQTTEHQDWQQIAVAKSLMQRFCVINGGPGTGKTYTVLRLLLALQASNENLKIVL
AAPTGKAQQRMTESIISSIEGLRGKVDDSALDKVPTDAVTLHRLLGLREFGVSTKYNHYN
QLTADVLIVDEASMVDLALMTRIVRALPEHARLYLIGDADQLPAVELGNVLEQLVSDETE
VFDKGDNAISSNASTRDDALSMGGVPSLMRQSIATLCPHIPLLPVNEEAKTYVATLQAPQ
RFKGQVAKVATAIQRGDANEAIAAIGENDSGDEKTKITSNALLGLKAGVHLLPEQQVNTR
DLQKLAKESFLPIFDAKSAEEALSCLNFVRWLTPVRKGVMGVEGLNSLVFDAIKHKIKKR
EGHFYQGQPIMIVKNHHPQRLSNGEVGVIWPDNKGKLYAWFYQDTKNEGEVPSADNKQNV
NVSNGQQKQALRSISLSRVPQFETVYAMTIHKSQGSEFNHVVLILPKPDSEKAANLFHRG
LVYTGLTRSKDGCLIIADNNTFTGMVAKVDKRYSGLSEAIKRITAKEQVLVLEDD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactatcaacaatgcgtgtcgtcgtttttcgataatttatttggcattgaagcc
atcgataagttcgtcgcaaaagagtttggctttgtagaaccgctgtctgaaagtgatgct
ttaatttgggcaggtttattggtacacctgtcgtacatgcagagaaatggccatagctgt
gtttatttaaaagatgttgcgggaactacgctttttaaagaggtagcaccttcggcggca
agtagtattgctgagcaaccatctggcgacgtacttcaaacagacgaaattcatgcaagc
ggacgagaagaaaaagcgcttaaaacaggctttgtgttaccagaattaacgcctctactt
aaaattgtgaaaagtgcgcttaaaaacgagcaggttgctcagctgttcgtctatgacaat
ggcaaactttacagccgtcgctactatgagtttgaacaagaggtagcgagaaacgttgtg
atgcgagcagcgcttgagccgttaactgaagaggctagcgaaaaagttaagcagctttgg
cctgctatattccccacacagaccacagagcatcaagactggcagcaaatcgccgttgct
aagagtttgatgcagcgcttttgcgtgataaacggcgggccgggaacggggaaaacctat
actgtgctgcgccttttactcgcgctccaggcaagtaatgagaatttaaaaattgtactg
gcagctcctaccggtaaagcgcagcagcgcatgactgagtctattataagcagtatagaa
ggacttcgggggaaggtagacgatagtgcccttgataaagtgcctaccgacgccgtaacc
ctgcacagattgctagggcttcgcgaattcggcgtttcaacaaagtacaaccattataac
caattgactgctgacgtcctcatagtagatgaggcaagtatggtcgatttagcgttaatg
actcgcatcgttagagcgttgccagagcatgctcgactttatcttatcggcgacgccgac
cagttgcctgcggtagagcttggcaacgtgttagaacaacttgttagcgacgaaacagag
gtttttgacaagggtgataatgctatatcaagtaacgcaagtactcgtgatgacgcgctt
tcaatgggaggagtgccttctttaatgcgacagagtatcgcaacgctttgcccacatatc
cccttgttgcctgtaaatgaggaagccaaaacttatgtggcgacacttcaggcaccgcag
cgcttcaaggggcaggtggcgaaggtggcgacggccattcagcgtggcgatgctaatgaa
gcaattgccgccattggtgaaaatgacagtggcgatgaaaagacaaaaattacgtcaaat
gctcttttaggcttgaaagctggcgttcatctattgccagaacaacaagtaaatactcga
gatttacagaagcttgcaaaagaaagcttcttgccaatatttgatgcgaaaagcgctgaa
gaagcgcttagttgtctgaattttgtccgatggctcacaccagtacgaaagggtgtaatg
ggggttgaaggtttgaacagtcttgtattcgacgccatcaagcacaaaattaaaaagcga
gaagggcacttctaccagggccagccgataatgatagtaaaaaatcatcatcctcagcgg
ctttcaaacggcgaagttggcgtaatttggccagacaacaagggtaaactttatgcttgg
ttttaccaagatacaaaaaatgaaggcgaagttccaagtgcagataacaaacaaaacgta
aatgtgagtaacgggcagcaaaagcaagcgcttcgcagcatatcactgtcaagagttccg
cagttcgagaccgtatatgcaatgactattcataaatcccagggctctgaatttaaccat
gtagtacttattttgccgaagcctgacagcgagaaggccgctaacctttttcatcgaggc
ttggtttacactgggttaacccgttcaaaagatggttgcttaatcattgctgataacaac
actttcactggtatggttgcgaaggttgacaagcgttattctgggctgtcagaagcgata
aaacgaatcactgccaaagagcaggtcctcgtactagaagacgattag
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