Alteromonas sp. OM2203: ACM0P2_14510
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Entry
ACM0P2_14510 CDS
T11346
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
altz Alteromonas sp. OM2203
Pathway
altz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
altz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACM0P2_14510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
altz03019
]
ACM0P2_14510
03400 DNA repair and recombination proteins [BR:
altz03400
]
ACM0P2_14510
Enzymes [BR:
altz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACM0P2_14510
Messenger RNA biogenesis [BR:
altz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACM0P2_14510
DNA repair and recombination proteins [BR:
altz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACM0P2_14510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
AAA_22
SWI2_SNF2
TniB
Epimerase
SNF2-rel_dom
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
XPP50750
LinkDB
All DBs
Position
3265325..3267316
Genome browser
AA seq
663 aa
AA seq
DB search
MYSDPIILQQLFGFSAFREGQKEAVDLLLSGHSTLAIFPTGSGKSLCYQYVATQLPHLTL
VVSPLLALMKDQLEFLHSKGIAAASIDSTLTPEENKQVMNDIRSGQCKVLMVSVERFKNE
RFRQFIESVRVSMLVIDEAHCISEWGHNFRPDYLKLPAYQKELNIHLVLLLTATATKKVK
MDMAARFDISPASIIQTGFYRPNLNLEVRPVLEPNKKQALLEEVKKQQGAGIVYVTLQNS
AGEVAQFLQQQGFTAKAYHAGLDSEVRQRIQQDFMNNKLQVVVATIAFGMGIDKSDIRFV
IHYDLPKSIENYSQEIGRGGRDGEVANCTVLANLDGLVTIENFVYGDTPDKSAIERVITD
IKSQAPVHLDTAKEIQPPDNSDNNVYQWETQINSLSSTSNIRQLPLKTLLVQLELANVIR
PLYAYFAEYKFRFISDKATILGLFSEERSRFLDAVFTHSNMKKVWGVVNFDSIYQHYGAE
RSRVVAALEYLHEHNHIELASRLITDVYRVNNEQLCTEDLTDKLAQYFAENEHKEIERIA
ALVGFFELNTCLSYSLSAYFDDTKTPLKCGHCSVCQGKVAKLSYSTPIAKPDMTQVAEAI
SALQSHLEGKFEGPITESIYCRFLTGMTMPLFTRFKVKQVKGFGSCENCRYADVKAAVSS
VIA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtactctgaccccattattttacagcagctatttggtttttcggcgtttcgcgagggc
cagaaggaagcggtggatttactgctaagtggtcattcaactctggcaatattccctact
ggttcgggtaaatcactttgctatcagtacgttgctacacagttgccgcatttaaccttg
gtggtgtcgccattgttggcgctgatgaaagatcagctggagtttcttcatagcaaaggc
attgcagcagccagtatcgactccacgttaacacctgaggaaaacaagcaagtgatgaat
gatatccgctctggtcaatgcaaagttttaatggtgtctgtggagcgttttaagaacgaa
cgttttagacagttcattgagtctgttagggtgagtatgttggttatcgatgaggcccac
tgcatctcggagtggggtcataattttcgccctgattacctgaagcttcctgcttatcag
aaagagctcaatattcatctagtattattactcaccgctaccgctactaaaaaagtaaaa
atggatatggcggcacgttttgatatttctccagccagcattatccaaacggggttttat
cgtccgaaccttaatctagaggttcgccctgttcttgagcccaataaaaaacaagctttg
ctagaagaagttaagaaacagcaaggtgcgggcatagtttatgtcacactgcagaacagc
gccggggaagtagctcagtttctgcagcagcaagggtttactgcaaaggcctaccacgct
ggactcgatagtgaggtcaggcaacgtattcagcaagatttcatgaacaacaagcttcaa
gttgtggtggcgactattgccttcggcatgggtattgataaatcggatattcgctttgtt
attcactacgacctaccaaaatctatagaaaactatagccaggaaattggcagaggcggg
cgagatggtgaagtagcaaactgcacggtattagcgaacctcgacggattggtcaccata
gaaaattttgtttatggagatacgcccgataaaagcgcaattgagcgcgtaattaccgac
attaaatcacaagcgccggttcatctagatactgcaaaagaaattcaacctccagataac
agcgacaacaatgtttaccagtgggaaacccaaattaacagcttatcgagcacaagcaat
attcgtcagcttccccttaaaacccttttagtgcagcttgaactcgcgaatgttattcga
ccgttgtacgcctactttgcagaatacaagttccggttcatttctgacaaagccaccata
ctcggtttattttcagaagagcgttcgcgctttttagatgcggtattcacgcactccaac
atgaaaaaggtatggggcgttgttaattttgacagtatttatcagcattacggtgcagag
cgttctagagtggttgcggcattggagtatttgcatgaacataatcacatcgagcttgca
tcacgcttaattaccgatgtttatcgcgttaacaacgaacaactatgcacggaagactta
acagataagttagcgcagtattttgctgaaaacgaacacaaggaaatagagcgtatagcg
gcgctggtaggcttcttcgaactcaacacctgtttaagctatagcctatcggcgtatttt
gacgataccaaaacgcctttaaaatgtggccactgcagtgtgtgccagggtaaggtggct
aagcttagttactcaacacctattgccaagccagatatgacacaagtggctgaagctatc
tcagcactacaatctcatttagaaggaaagtttgaaggccctattaccgaatccatctat
tgccgttttcttactggcatgacgatgcctttatttacgcgctttaaagtaaagcaagtg
aaaggcttcggaagttgtgaaaactgccgctatgcagatgtaaaagcggccgtatcttct
gtaatagcgtaa
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