Alteromonas sp. OM2203: ACM0P2_20745
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Entry
ACM0P2_20745 CDS
T11346
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
altz Alteromonas sp. OM2203
Pathway
altz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
altz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACM0P2_20745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
altz03021
]
ACM0P2_20745
Transcription machinery [BR:
altz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACM0P2_20745
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
PhyR_sigma-like
HTH_20
Sigma70_ECF
GerE
HTH_38
L27_N
Motif
Other DBs
NCBI-ProteinID:
XPP53869
LinkDB
All DBs
Position
p-wang:211081..211608
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AA seq
175 aa
AA seq
DB search
MKPAADLHWDELENSDVKDLLASLKAFIRSLTVDKSQADDIFQETVLRTKKSKHLSELDS
PLAYMITVSKTVLYDFQKKNVPQYVDIEEVSIQSDDYSPSNTYLNQQKLALVDSILLNMS
PLRREIFLLRRVDGLARDDIARRLDVSVEVVKKHLTRAMVEITVKLEEAGWLEDN
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagcggcagatttacattgggatgaattagaaaatagcgacgtaaaagatttg
ctcgcttcgctaaaggcatttattcgaagtttaacggtcgataaaagccaagctgacgat
atctttcaagagacagtgttgaggacgaagaaaagcaagcatctatcggaattagactct
ccactcgcctatatgattacggtgtcgaaaacagttttatacgattttcagaaaaaaaat
gttccgcagtacgtcgatattgaagaagtaagtattcaatctgacgactattcgccaagt
aatacttaccttaatcaacagaaactggcgctggtagacagtatactcttgaacatgtca
cctctcagaagagaaatttttctacttcgaagagtagacggcttggcgcgggatgacatc
gctagaaggttagatgtaagtgttgaggtggtcaaaaagcatttaacaagagcgatggta
gaaatcacggtgaaacttgaagaagctggatggctagaggacaactaa
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