Aspergillus luchuensis: AKAW2_10380A
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Entry
AKAW2_10380A CDS
T08060
Symbol
LSM7
Name
(RefSeq) Sm-like protein lsm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03018
RNA degradation
aluc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AKAW2_10380A (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
AKAW2_10380A (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aluc03019
]
AKAW2_10380A (LSM7)
03041 Spliceosome [BR:
aluc03041
]
AKAW2_10380A (LSM7)
Messenger RNA biogenesis [BR:
aluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AKAW2_10380A (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
AKAW2_10380A (LSM7)
Spliceosome [BR:
aluc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
AKAW2_10380A (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
FoP_duplication
DUF150_C
Motif
Other DBs
NCBI-GeneID:
64954659
NCBI-ProteinID:
XP_041537100
UniProt:
A0A146FCN1
LinkDB
All DBs
Position
1:complement(join(1125646..1125773,1125825..1125896,1125951..1126161))
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AA seq
136 aa
AA seq
DB search
MSERGSFRGGGRGRGGGYDRSGGRGAHRGGGAGGGAQQQQQQEKPKKENILDLNKYMDKE
VRVKFNGGREVVGLLKGYDQLMNLVLDDVKESMRDDEGNENTRSLGLVVARGTIIVLISP
ADGSEEIANPFVQPEE
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagaggctcgttccgtggaggtggtcgcggccgcggcggaggctatgaccgg
tctggcggtcgtggcgcccatagaggtggcggtgctggtggcggtgctcagcagcagcaa
cagcaggagaagcccaagaaggaaaacatcctcgatttgaacaagtacatggacaaggag
gtgcgcgtcaagttcaatggcggtcgtgaggttgttggtctgctcaagggatacgaccag
ctcatgaacctggtccttgacgatgttaaggaatccatgcgcgatgacgagggtaacgag
aacactcgctcgctgggactcgtcgtggcccgtggcaccatcatcgtcctgatctcgccc
gccgacggcagcgaggagattgccaaccccttcgtgcaacccgaagagtaa
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