KEGG   Aspergillus luchuensis: AKAW2_10966S
Entry
AKAW2_10966S      CDS       T08060                                 
Symbol
RPB4
Name
(RefSeq) RNA polymerase B
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
aluc  Aspergillus luchuensis
Pathway
aluc03020  RNA polymerase
aluc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aluc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AKAW2_10966S (RPB4)
  09124 Replication and repair
   03420 Nucleotide excision repair
    AKAW2_10966S (RPB4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aluc03021]
    AKAW2_10966S (RPB4)
   03400 DNA repair and recombination proteins [BR:aluc03400]
    AKAW2_10966S (RPB4)
Transcription machinery [BR:aluc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     AKAW2_10966S (RPB4)
DNA repair and recombination proteins [BR:aluc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      AKAW2_10966S (RPB4)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Cut8
Other DBs
NCBI-GeneID: 64955245
NCBI-ProteinID: XP_041537686
LinkDB
Position
1:join(2808003..2808193,2808298..2808425,2808518..2808645)
AA seq 148 aa
MSVQLPPATHRKRTLPQGELEAASTLKLGADQNTHTLSLSEARLVINKVLENKRRGGKKY
EEPENLTKTLDYLEVFARFKDEENIKAVERLLNSHTELEMFERSQLGSLCCDNAEEAKSL
IPSLQHKISDGDLQELLDELTKLRNFTE
NT seq 447 nt   +upstreamnt  +downstreamnt
atgagcgtccaactcccccccgccacgcaccgcaagcgcaccctcccacaaggcgaactc
gaagccgcgtcgacgctgaagctcggcgcggaccagaacacgcatacgctatcgctgtcc
gaagcaagattggttattaataaggtgttggagaataagcggaggggtgggaagaagtat
gaggagccggagaaccttacgaaaacgctcgattacttggaggtatttgcgcggttcaag
gatgaagagaatatcaaggctgtcgagcggttgttgaattcgcatacggagttggagatg
tttgagcggtcgcagcttggaagtctgtgctgcgataacgccgaggaagccaaatcgctc
attcccagtctgcagcataagatctcggatggcgatttgcaggagctgttggatgagttg
accaagttgcgcaatttcacagagtag

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