Aspergillus luchuensis: AKAW2_11254A
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Entry
AKAW2_11254A CDS
T08060
Symbol
RFA1
Name
(RefSeq) replication factor A protein 1
KO
K07466
replication factor A1
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03030
DNA replication
aluc03420
Nucleotide excision repair
aluc03430
Mismatch repair
aluc03440
Homologous recombination
aluc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKAW2_11254A (RFA1)
03420 Nucleotide excision repair
AKAW2_11254A (RFA1)
03430 Mismatch repair
AKAW2_11254A (RFA1)
03440 Homologous recombination
AKAW2_11254A (RFA1)
03460 Fanconi anemia pathway
AKAW2_11254A (RFA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aluc03000
]
AKAW2_11254A (RFA1)
03032 DNA replication proteins [BR:
aluc03032
]
AKAW2_11254A (RFA1)
03400 DNA repair and recombination proteins [BR:
aluc03400
]
AKAW2_11254A (RFA1)
Transcription factors [BR:
aluc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
AKAW2_11254A (RFA1)
DNA replication proteins [BR:
aluc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
AKAW2_11254A (RFA1)
DNA repair and recombination proteins [BR:
aluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
AKAW2_11254A (RFA1)
MMR (mismatch excision repair)
AKAW2_11254A (RFA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
AKAW2_11254A (RFA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
DUF7627
Motif
Other DBs
NCBI-GeneID:
64955533
NCBI-ProteinID:
XP_041537974
UniProt:
A0A146FE43
LinkDB
All DBs
Position
1:complement(join(3612683..3612776,3612831..3613732,3613787..3614324,3614379..3614469,3614531..3614682,3614732..3614775))
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AA seq
606 aa
AA seq
DB search
MSSEAASQVSVGALSAIFDDTKPQTREPIVQCVQIKQLPSQQSHPERYRAVFSDISNYVQ
TMLATQLNPMVSSELLRKGCFVRLKSFQANSVKGKKILIILDLEVLEGLGVAEKIGEPKP
LESKTDEDDKHQPTTISSNGFYGSKMSGAQVQSNTGVQSARPVLAAAHATIYPIEAISPY
SHKWTIKARCTSKTNIKTWHNRNTEGRLFSVNLLDDSGEIRATGFNDQCDMLYDVFQEGG
VYYISNCRVQIAKKQFTNLNNDYELTFERDTVVEKAEDQSDVPQVRFNFTSIGDLQSVEK
DTTIDVIGVLKEDMGVSQITSKTTNKPYNKRELVMVDNTGFSVRLTIWGTTAQNFNALPE
SVIAFKGVKVSDFGGRSLSLLSSGSMAVDPDIEEAHKLKGWYDAQGRAENFSSHASLLGA
ASSTMKSDQFKTIAQIREEQLGMSEEAVYFSLKATVIYIKQDNMSFAYPACLSEKCNKKV
TELDPGQWRCERCDKTHPRPDYRYIMHVNVSDHTGQLWLSCFDDVGKSMMDMSANQLMEL
FQTDEKAAGDAFQDANCRTWNFRCRAKIDHFGEQQRIRYQVSSANPINYSQEASRLADLI
ESYNVS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagaagcagcatctcaggtctccgttggggcactcagcgctatcttcgatgat
acaaagcctcaaacgcgtgagcctattgttcaatgtgtccagataaagcaattgccatct
caacagagccacccggaacgctaccgagcggtattcagtgacatttcaaattatgtacag
acgatgcttgcgacccaattgaaccccatggtgtctagtgagctattacggaagggatgt
tttgttcgcctgaagtcgttccaagcgaactccgtgaaaggcaaaaagatccttattatt
ctcgaccttgaagtcttggagggactgggagtggccgagaagattggcgaaccaaaacca
ctcgaaagcaaaacagatgaagacgacaagcaccaacccactacaatctccagcaacggt
ttctatggatcgaagatgtcaggcgcacaggtccagtcaaataccggagtgcagtcagca
cgacctgtcttggccgcagcgcatgctactatatatcccatcgaagctatttcaccatat
tctcacaaatggacgatcaaagcacgctgtacgagcaagacaaatattaagacttggcac
aataggaataccgaagggaggctcttcagcgtcaatctactggacgacagtggcgaaata
cgagctactggattcaacgaccaatgcgacatgctgtatgacgtcttccaggagggcggt
gtatactatatctccaattgccgcgtgcaaattgccaaaaagcagttcacgaacttgaac
aacgattatgagctgacttttgaaagggatacggtggttgaaaaggcagaggatcagagt
gatgttccccaggttcgattcaatttcacttctattggtgacctccaatcggtagaaaaa
gatactacgatcgatgtgataggcgtgctgaaagaggacatgggggtttcacagatcaca
tccaaaacaacgaacaagccctataacaagcgcgagctggtcatggttgacaataccggg
ttctctgttcgcctaactatctggggcactacagctcagaatttcaacgccttgcccgag
tctgtaatagctttcaaaggcgtgaaggtctctgactttggcgggcgtagtctgagtttg
ctgagctcgggttcaatggcggttgatcctgacattgaggaagcccacaagctcaaaggc
tggtatgacgcacaaggcagagccgagaatttttcttcacatgcttccttattaggcgca
gcctcatcaacgatgaagtcggaccagttcaagacaatcgcccaaataagagaggagcaa
ttgggtatgtccgaggaagcggtttacttttcgctgaaagcaacggttatctacataaag
caggacaacatgtcctttgcttatcctgcttgtctctcagaaaaatgcaacaagaaggtg
accgagcttgatcccggccagtggcgctgtgagcgctgcgataagactcacccccgacca
gattaccgctacataatgcatgttaatgttagcgaccataccggccaactttggctaagc
tgctttgacgacgtgggcaaatcgatgatggacatgtcagccaatcagttaatggaactg
ttccagacggatgagaaagcagctggcgacgcattccaggatgccaattgccggacctgg
aatttccgatgccgtgccaaaatagatcatttcggcgaacaacaacgtatacggtatcag
gtatcctcggccaacccgataaattattcccaggaggcttcacgccttgccgatcttatt
gaatcttacaatgtatcttga
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