Aspergillus luchuensis: AKAW2_11440S
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Entry
AKAW2_11440S CDS
T08060
Symbol
SKI6
Name
(RefSeq) exosome non-catalytic core component
KO
K11600
exosome complex component RRP41
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKAW2_11440S (SKI6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aluc03019
]
AKAW2_11440S (SKI6)
Messenger RNA biogenesis [BR:
aluc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AKAW2_11440S (SKI6)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
AKAW2_11440S (SKI6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
64955719
NCBI-ProteinID:
XP_041538160
UniProt:
A0A7R7W0Z2
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Position
1:join(4307980..4308278,4308349..4308859)
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AA seq
269 aa
AA seq
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MPLDTSTTYPLTKLRLDGRRWNELRLLQAQISTNPASSGSSYLAMGNTAILCSVHGPAEG
RRGDATGGAAGSAGAVVEVDVNVAGFAGVDRKRRAGGSDKQSSRVATILRSAFQSHLHTH
LYPHSTISIHVSVLSSDGSLLAAAVNACTLALVDAGIPMPGLLCGCTSGMSGSASTPRDP
NNDTLDPLLDLSLPEEQELPFLTVGTTTAVPVGEAAMINEDEDEMKVAMLTMDSKVHCTY
VETMLAVGIDGCKQIREILEGVIKKSARR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcgacacatccacaacatatcccctcaccaagcttcgccttgatggccgtcgc
tggaatgagcttcgactgctccaggcccagatctccacgaaccccgccagttcgggctca
tcctacttggccatgggcaacaccgcgatcctgtgctccgtccacggtcccgcagagggg
cgtcgcggtgatgccacgggtggtgctgctggatcagcaggtgcggtagtagaggtggat
gtcaatgttgcaggatttgctggagtggaccgcaagcgcagagccggcggaagtgacaaa
caatcttcgcgcgtcgcaacgatactacgctctgctttccagtcgcatcttcatacccac
ctctaccctcacagtacgattagcatccacgtctcggttttgtcgtcagacggttcgctc
ctcgccgcggcggtcaatgcctgtacgctggcgcttgtggatgccggtattcccatgcca
ggactcctctgtgggtgcacgtcgggaatgagcggcagtgcatctacgccgcgggatccg
aataatgacacattggatccgctgctggacttgtctctgccggaggagcaggagcttccg
ttccttacggtgggaacgacaacggctgtaccggtgggagaggcggctatgattaacgag
gatgaggacgagatgaaggtagcaatgctgacgatggactccaaggtgcattgcacatat
gttgagacaatgctggcggtgggaattgacggatgcaagcagatccgggagattttggaa
ggggtgatcaagaagtcggcacgccggtga
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