Aspergillus luchuensis: AKAW2_20473A
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Entry
AKAW2_20473A CDS
T08060
Symbol
PAB1
Name
(RefSeq) protein phosphatase PP2A regulatory subunit B
KO
K13126
polyadenylate-binding protein
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03015
mRNA surveillance pathway
aluc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AKAW2_20473A (PAB1)
09123 Folding, sorting and degradation
03018 RNA degradation
AKAW2_20473A (PAB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aluc03019
]
AKAW2_20473A (PAB1)
03041 Spliceosome [BR:
aluc03041
]
AKAW2_20473A (PAB1)
Messenger RNA biogenesis [BR:
aluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
AKAW2_20473A (PAB1)
mRNA cycle factors
Stress granule specific factors
AKAW2_20473A (PAB1)
Spliceosome [BR:
aluc03041
]
Complex C
Other components
Complex C specific factors
AKAW2_20473A (PAB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RBD_DEAH11
RRM_10
RRM_MARF1
RRM_occluded
YflT
RRM_3
PABC_AtC3H46
Inhibitor_I53
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
64956858
NCBI-ProteinID:
XP_041539299
UniProt:
A0A7R7W366
LinkDB
All DBs
Position
2:complement(join(1480906..1481065,1481126..1483257))
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AA seq
763 aa
AA seq
DB search
MSADVSTTPAAENVNGAAEASPAAAAPSATTPEVTAVENSTPASAANQPHSASLYVGELD
PSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG
KPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSK
GYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNL
DSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRS
QKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLRELFGPYG
TITSAKVMRDTNVERESSPESAGKEKEANKENDKEATPEAEKAEEKAEEKPAESSEEKDK
EAKKSDKKPFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLE
ASIQARNTIRQQQAAAAAGMPQPYMQPAVFYGPGQQGFIPGGQRGMAFPPQPGMVMGIPG
GRPGQYPGPFPGQQGGRGMGPNQQIPPNFAQGIPMGMQGPGAIPNGMGYPQMAQVQFGRG
AGGRGQVPGMPMGQGMRGGPGYGQGRGVPVQQGQIRPGQGGRGQNAAAPAGPQEGAAGGV
NAQTLGAAPPAQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLSLLEDEEALRA
KVDEALSVYDEYMKNKGTESEAPAAEAAKPEAEKEASTEENKA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgacgtctctaccacccccgctgccgagaacgtcaacggcgccgctgaggcc
agccctgctgctgctgcccccagtgccaccacccccgaggtcactgccgttgagaactct
actccggcttccgctgccaaccagcctcactcggcttccctctatgtcggtgaactcgac
ccctccgtgaccgaggccatgctctacgagctgttctcttccatcggccaggttgcttcc
atccgtgtctgccgtgatgctgtcaccagacgctccctgggatacgcctacgttaactac
aacaacaccgccgatggtgagcgtgctctggaagacctcaactacactctgatcaagggc
aagccctgccgtatcatgtggtcccagcgtgaccccgctctccgcaagactggccagggc
aacgtcttcatcaagaacctggacagcgccattgacaacaaggctctccacgacaccttc
gccgccttcggcaacattctcagctgcaaggtcgctcaggatgagttcggcaactccaag
ggatacggtttcgtccactacgagactgctgaggctgccaacaacgccatcaagcatgtc
aacggcatgctgctgaacgacaagaaggtcttcgtcggtcaccacatctccaagaaggac
cgccagagcaagttcgaggagatgaaggccaacttcaccaacgtctacatcaagaacctc
gactctgagatcgatgacgatgagttccgcaagatgttcgagaagttcggtgagatcacc
tccgccaccctcagccgtgaccaggagggcaagagccgtggcttcggttttgtcaacttc
tctacccacgagagcgcgcaggccgccgtcgaggagatgaacgacaaggagatccgcagc
cagaagctctacgtcggtcgtgcccagaagaagcacgagcgcgaggaggagctgcgcaag
cagtacgaggccgcccgcctggagaaggcttccaagtaccagggtgtcaacctctacgtg
aagaacctgaccgacgacattgatgatgagaagctccgtgagctcttcggaccttacggc
accatcacctctgccaaggttatgcgcgacaccaacgtcgagcgcgaatcgtctcccgaa
tctgctggtaaggagaaggaggctaacaaggagaacgacaaggaggccacccccgaggct
gagaaggccgaggagaaggctgaggagaagcccgccgagtcctccgaggagaaggacaag
gaggccaagaagtctgacaagaagcccttcggtaagagcaagggtttcggtttcgtctgc
ttcagcagccccgatgaggcttccaaggctgtcaccgagatgaaccagagaatggtcaac
ggcaagcccctctacgttgcccttgcccagcgcaaggatgtccgccgcagccagcttgag
gccagcatccaggctcgcaacaccatcagacagcagcaggccgccgctgccgctggtatg
ccccagccttacatgcagcccgctgtcttctacggccccggccagcagggtttcatccct
ggtggtcagcgcggcatggccttcccccctcagcccggtatggtgatgggtatccccggt
ggacgccccggccagtaccccggtcccttccctggccagcagggtggtcgcggcatgggc
cccaaccagcagatccctcccaactttgctcagggtatccccatgggcatgcagggccct
ggtgccattcctaacggcatgggttacccccagatggctcaggtgcagttcggacgcggc
gctggtggccgtggtcaggtccccggaatgcccatgggtcagggtatgcgtggcggtccc
ggttacggccagggccgtggtgttcctgttcagcagggtcagatccgccctggccagggt
ggtcgcggacagaacgctgctgctcccgccggtcctcaggaaggtgccgctggtggcgtt
aacgctcagactctcggtgccgctcccccggcccagcagaagcagatgctcggtgaggct
ctctaccccaagatccaggcccagcagcctgagctggctggtaagatcactggtatgctt
ctggagatggacaacaccgagttgctcagcctgcttgaggacgaggaagcccttcgcgcc
aaggtcgacgaggcccttagcgtttacgatgagtacatgaagaacaagggcaccgagtcc
gaggctcctgccgctgaggctgccaagcccgaggcggagaaggaggcctcgaccgaggag
aacaaggcgtaa
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