KEGG   Aspergillus luchuensis: AKAW2_21274S
Entry
AKAW2_21274S      CDS       T08060                                 
Symbol
LSM4
Name
(RefSeq) RNA processing protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
aluc  Aspergillus luchuensis
Pathway
aluc03018  RNA degradation
aluc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aluc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AKAW2_21274S (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AKAW2_21274S (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aluc03019]
    AKAW2_21274S (LSM4)
   03041 Spliceosome [BR:aluc03041]
    AKAW2_21274S (LSM4)
Messenger RNA biogenesis [BR:aluc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     AKAW2_21274S (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     AKAW2_21274S (LSM4)
Spliceosome [BR:aluc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    AKAW2_21274S (LSM4)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 64957659
NCBI-ProteinID: XP_041540100
UniProt: A0A7R7ZX19
LinkDB
Position
2:join(3890210..3890212,3890280..3890471,3890547..3890717)
AA seq 121 aa
MLPLGLLTAAQGHPMLVELKNGETLNGHLASCDNWMNLILKEVVQTSPEGDRFFRLPEVY
VRGNNIKYLRIPEEIIEMVKEQQANQSQNRNRGPREGGRGDRGRGGGRGRGRGRGRGGRD
A
NT seq 366 nt   +upstreamnt  +downstreamnt
atgttacctctcggtctcctgacggccgcgcaaggccaccccatgctcgtggaactcaag
aacggcgaaaccctcaacggacaccttgccagttgcgacaactggatgaacttgatactg
aaggaagttgttcagacgagccctgaaggtgatcgcttcttccggctaccggaggtctac
gtcagaggaaacaatatcaaatacctgcgaatccccgaagaaatcatagagatggtgaag
gagcaacaggcgaaccaatcgcaaaatcgcaaccgcggaccgcgtgagggtggtcggggt
gaccgaggtcgtggtggaggccggggtcgtggacgtggccgcggccgtggtggcagagac
gcttga

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