Entry |
|
Symbol |
CRM1
|
Name |
(RefSeq) karyopherin transporter
|
KO |
|
Organism |
aluc Aspergillus luchuensis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:aluc00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AKAW2_30959A (CRM1)
03008 Ribosome biogenesis in eukaryotes
AKAW2_30959A (CRM1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
AKAW2_30959A (CRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:aluc03019]
AKAW2_30959A (CRM1)
03009 Ribosome biogenesis [BR:aluc03009]
AKAW2_30959A (CRM1)
03016 Transfer RNA biogenesis [BR:aluc03016]
AKAW2_30959A (CRM1)
03036 Chromosome and associated proteins [BR:aluc03036]
AKAW2_30959A (CRM1)
Messenger RNA biogenesis [BR:aluc03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AKAW2_30959A (CRM1)
Ribosome biogenesis [BR:aluc03009]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
AKAW2_30959A (CRM1)
Pre-60S particles
AKAW2_30959A (CRM1)
Transfer RNA biogenesis [BR:aluc03016]
Eukaryotic type
tRNA transport factors
tRNA export factors
AKAW2_30959A (CRM1)
Chromosome and associated proteins [BR:aluc03036]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
AKAW2_30959A (CRM1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3:complement(join(2792466..2792706,2792777..2792948,2793002..2793380,2793450..2793679,2793794..2794264,2794313..2795084,2795131..2795843,2795893..2795964,2796020..2796092,2796156..2796185,2796272..2796337))
|
AA seq |
1072 aa
MSVSIQELDNTVRAFYEGKGDLQKQAQQTLTEFKQNPDAWLIVGNILQESTYPQTKYLAL
QVLDDVIMTRWKVLPREQCLGIRNFIVNFIIENSKSEDKLRSERAFLNKLNLVLVSILKQ
EWPHNWPTFINEIISSCHTSLSICENNMAILRLLSEEVFDFSQDQMTSVKARNLKTSMTQ
EFSSIFQLCSEVLNTANQPSLVKATLETLLRFLNWIPLGYIFETPIINTLLTRFLDVPEF
RNVTLKCLTEIGGLQIGNPYNYDERLVHMFTETLTAVSRIIPLSMDLKQTYAKSNSRDQE
FVLNLALFLSSFFSAHLNLIEKLPNRDYLTHAHFYLIRISQIDDREVFKICLEYWTRLVQ
ELYEEMQQLPITDINPLVSMGVSGLSNGGAPHPSTLANYPLRKHKYEEVLSSLRTVMIEK
MVRPEEVLIVENDEGEIVREFVKESDTIQLYKTIRECLVYLTHLDVVDTENIMIEKLAKQ
VDGSEWSWANCNTLCWAIGSISGAMNEETEKRFLVNVIKDLLGLTEMKRGKDNKAVVASN
IMYIVGQYPRFLKAHWKFLKTVVNKLFEFMHETHEGVQDMACDTFIKIANKCRRHFVALQ
PGENEPFIEEIVRNMRKITCDLSPQQVHTFYEACGYMISAQGQKGLQDRLIENLMSLPNS
AWDAIIVQANQNPAILQDGETIKIIGNIMKTNVAACSSVGTYFYSQLGRIYHDMLNMFRA
SSQLISDAVAHDGNIATKTPKVRGLRTIKKEILKLIDTYVQKADDLEMVNANMVPPLLEA
VLVDYNRNVPDAREAEVLNVMTTIIHKLHNLMEDKVPLIMESVFECTLGMINKDFHDYPE
HRVQFFKLIQAINLYCFPALLKLDATQFKFVIDSCMWASKHDNREVENTGLTMCLELMNN
MADTDAQTSNIFFQQFYIPILQDVFFVLTDSDHKAGFKSQAMLLSRMFYFIESGKVQNPI
YSPEQAPLGTSNKDFLQEYVANLLQNAFKNLQEIQIKQFVVGLFAFNDDFNKFKTHLRDF
LISLKEFSGDNADLYAEEREQALRDAKAAERDRAMRVGGLLKPSEMDQEDEL |
NT seq |
3219 nt +upstreamnt +downstreamnt
atgtctgtttccatacaagagttggacaacacagtccgggccttctatgagggcaagggt
gatctgcaaaagcaagctcagcagaccctgacggagttcaagcaaaatccggatgcttgg
ttaattgtgggaaatattctccaagaatcaacatacccacagacaaaatatcttgctctc
caggtccttgacgatgtgattatgacgcgatggaaggtcttacccagggagcaatgccta
ggtattcggaattttattgtcaacttcatcatcgagaactcgaaatcggaggacaagcta
aggagtgagcgagccttccttaataagctcaacctggttctcgtttccatcctgaaacaa
gagtggccacataactggccaacttttatcaacgaaatcatctcgtcttgccataccagc
ctgtccatctgcgagaataacatggcgattcttcgtctactatccgaagaagtgtttgac
ttttcccaggatcaaatgacttcggtcaaagcgagaaacttgaagacctcaatgacgcag
gagttctcgtccattttccagctatgttccgaggtcttgaacacggcgaaccagccaagt
cttgtcaaagctacgctagagactctgcttcgtttcttgaactggattcctttaggatat
atcttcgaaactcccatcataaacaccctgctgacgcggtttctggatgttcctgagttc
agaaatgtcacactcaagtgcctcactgaaatcggcgggttacagatcggcaacccgtac
aattacgatgaaaggctggtccatatgttcacagagacgctgactgcagtttcaagaatc
atccccttgtccatggatttgaaacagacctatgctaagagcaactcgagggaccaagag
ttcgttctcaatttggcactgtttctttctagcttttttagcgctcatctgaatctgatc
gaaaaattgcccaaccgtgactacctcacccacgcgcatttctacctcattcgtatcagt
caaatcgacgacagggaagtcttcaagatctgcctggaatattggacgagactagtgcaa
gaactgtacgaagagatgcagcagcttccaatcacagatatcaatcctctggtgagtatg
ggtgttagcggcctgtcgaacggaggtgcaccgcatcccagcacgttggccaactatcct
ctccggaaacacaagtacgaggaggttttatcaagccttcgcacagtcatgattgagaag
atggtgcgtcctgaggaagtcttgattgttgaaaatgacgaaggcgagattgttcgcgaa
ttcgtcaaggaaagtgacaccatccaactttacaagacgatacgcgaatgcctggtctat
ctgactcatctggatgtcgtcgacacagagaatatcatgattgaaaagttagccaagcag
gttgacgggtccgaatggtcctgggccaattgtaatactctctgctgggccattggttca
atttccggagccatgaatgaagagaccgagaagcgattcctggtcaacgtcatcaaagat
ctccttggtcttaccgaaatgaagcgtggaaaggacaacaaagccgtcgtggccagtaat
atcatgtatattgtcggacagtatccgagattcctgaaagcgcactggaaattcttgaag
accgtggtgaacaagctcttcgagttcatgcatgagactcatgaaggtgttcaggacatg
gcttgcgatacattcatcaagattgcgaataaatgcaggcggcattttgttgcgcttcaa
ccgggggagaacgaaccattcattgaagaaattgttcgcaatatgaggaaaattacttgt
gatctttctcctcagcaggtccacactttttacgaagcctgtggctacatgatctcggca
caaggccaaaagggcctccaagaccgactaatcgaaaatttgatgtccctgcctaactca
gcctgggatgccatcatagtgcaggcaaaccagaaccccgctatacttcaagatggcgag
acgataaaaatcatcggaaatattatgaagacgaatgtcgcagcatgttcctctgtgggc
acttacttctattcccagcttggacggatttatcatgacatgctcaatatgttccgtgcc
tccagccagcttatcagtgacgctgtagcgcatgatggcaacattgcaacgaagaccccg
aaagtccggggtctaaggacgatcaagaaggaaatactgaagctcatcgacacctatgtg
cagaaagccgacgacctggaaatggtaaatgcaaacatggtccctccgctcctggaggcc
gttctcgtcgactacaatcgcaatgtccctgacgcgcgcgaggcggaggtcttgaacgtc
atgacaacgattattcacaagttacacaatctgatggaagacaaagtccccttgataatg
gagagcgtctttgaatgcacactaggaatgatcaacaaagacttccatgactatccagag
caccgtgttcagttcttcaagttgattcaagctatcaacttgtactgtttcccggcattg
ctcaagctcgatgctacgcaattcaagtttgtcatcgactcttgcatgtgggccagcaaa
cacgacaatcgtgaagtcgagaatacaggtctcacaatgtgccttgagctcatgaacaac
atggccgacactgatgctcagacctcaaatattttcttccaacagttttacattcctatc
ttgcaggatgtgttctttgtcctgacagacagtgatcataaagccgggttcaaatcacag
gccatgctattgtcgcgcatgttctacttcattgagtctggcaaagtgcaaaacccgatt
tattctcctgagcaggcacccttagggacatccaacaaggatttcttgcaggaatatgtc
gcgaatctcctacaaaatgctttcaagaatctccaggaaatccaaatcaaacaatttgtt
gttggcttgtttgcattcaatgacgactttaacaagttcaagacgcacctgcgtgatttc
ttgatatcactgaaggagttctccggtgataacgcagacttgtatgcggaagaaagggag
caagccttgcgggatgctaaagccgctgaacgagaccgagcaatgagggtaggtggtctt
ttgaagccatccgaaatggatcaagaggatgagctatga |