KEGG   Aspergillus luchuensis: AKAW2_30963A
Entry
AKAW2_30963A      CDS       T08060                                 
Symbol
LSM6
Name
(RefSeq) U4/U6-U5 snRNP complex subunit lsm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
aluc  Aspergillus luchuensis
Pathway
aluc03018  RNA degradation
aluc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aluc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AKAW2_30963A (LSM6)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AKAW2_30963A (LSM6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aluc03019]
    AKAW2_30963A (LSM6)
   03041 Spliceosome [BR:aluc03041]
    AKAW2_30963A (LSM6)
Messenger RNA biogenesis [BR:aluc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     AKAW2_30963A (LSM6)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     AKAW2_30963A (LSM6)
Spliceosome [BR:aluc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    AKAW2_30963A (LSM6)
SSDB
Motif
Pfam: LSM SM-ATX LSM14 Hfq
Other DBs
NCBI-GeneID: 64958969
NCBI-ProteinID: XP_041541410
UniProt: A0A7R8A905
LinkDB
Position
3:complement(join(2911549..2911571,2911633..2911746,2911899..2912004))
AA seq 80 aa
MENGASSDGKDPSAFLGEIIGAPVTVKLNSGVVYKGELQSVDGYMNIALEKSEEFVNGNL
SRSYGDAFIRGNNVLYISAH
NT seq 243 nt   +upstreamnt  +downstreamnt
atggagaacggtgcctcatctgatggcaaggatccctcagcttttctgggtgaaatcatt
ggcgccccagttactgttaaattgaactcaggcgttgtctataaaggggaacttcaatcg
gtagatggctatatgaatatcgctctggagaaatctgaggagtttgttaatggaaatctg
tcccgcagttacggggatgccttcattcgcggaaataacgtgctgtatatatccgcgcat
taa

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