Aspergillus luchuensis: AKAW2_31111A
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Entry
AKAW2_31111A CDS
T08060
Symbol
SOF1
Name
(RefSeq) rRNA-processing protein sof1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
aluc
Aspergillus luchuensis
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aluc03009
]
AKAW2_31111A (SOF1)
04121 Ubiquitin system [BR:
aluc04121
]
AKAW2_31111A (SOF1)
Ribosome biogenesis [BR:
aluc03009
]
Eukaryotic type
90S particles
Other 90S particles
AKAW2_31111A (SOF1)
Ubiquitin system [BR:
aluc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
AKAW2_31111A (SOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
eIF2A
Beta-prop_HPS5
WD_LRWD1
NBCH_WD40
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
64959117
NCBI-ProteinID:
XP_041541558
UniProt:
A0A7R7W7H0
LinkDB
All DBs
Position
3:complement(join(3312734..3313094,3313154..3314133,3314191..3314193))
Genome browser
AA seq
447 aa
AA seq
DB search
MKIKALSRPTSSQQAPGTAVVRQPRNLDPAQHPFERAREYTRALNATKLERLFAAPFLGQ
LGQGHVDGVYTMAKDPGSLERFASGSGDGVVKVWDLTTQGEIWNTQAHDNIVKGVCWTPD
RKLLSCASDKTVKLFDPYNSAPEAPPLATYLGQGAFTCLTHHRDLPYFAASSSQISIYDL
SRPSSTPSQTLHWPTNVDTITSIAFNQTETSILGSTGIDRSIVMYDLRTSSPLHKMVLRL
ASNAISWNPMEAFNFAVANEDHNVYMFDMRKMDRALNVLKDHVAAVMDVDFSPTGQELVT
ASYDRTIRLWNRSTGHSRDIYHTQRMQRVFSAKFTPDNKYVLSGSDDGNIRLWRANASDR
SGVKSARQRAKLEYDQALIQRYSHMPEIRRIRRQRHVPKPIKKAREIKREELMAIKRREE
NVRKHTKKENLPKRQSEREKMILAKEQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaagctctctctcgtcccacttcctcgcaacaggctccgggaaccgctgtc
gttcgacagccccgaaacctcgacccggcgcagcatccattcgagcgggctcgtgaatac
acccgtgctctcaatgctaccaagttagagcgcctatttgctgcacccttcttgggccag
ctgggccaaggccatgtggacggtgtgtatactatggccaaggacccaggctctctggaa
cggttcgccagtggcagcggtgatggtgtagtcaaggtgtgggatttgaccacccaggga
gagatctggaacacccaggcacacgacaacattgtcaagggggtgtgttggacccccgat
cggaagttgctttcttgcgcgagcgacaagaccgtcaagcttttcgacccgtacaactcg
gcacccgaagcaccaccgctagcaacctacctgggccagggcgctttcacctgcctcacg
caccatcgggacctgccctacttcgccgcatcctcctctcagatctctatctacgatctc
tcccgtccttcctccactccgtcccagacccttcactggcccaccaacgtggataccatc
acctccatcgctttcaaccagaccgagacctctatccttggttcaaccggcattgatcgc
tcgattgtcatgtacgacctccggacatcgtcccctcttcacaagatggttctccgcctg
gcgtcgaacgcgatctcgtggaacccgatggaagcgttcaactttgccgttgccaacgaa
gaccacaatgtctacatgttcgacatgcgcaagatggatcgcgctttgaacgtgctcaag
gaccacgtcgctgctgtgatggatgtggacttcagtcccaccggtcaagaacttgtcact
gcctcttacgatcggacgatccgcttgtggaacagatccacgggtcactctcgcgacatc
taccacacccagcgtatgcaacgtgttttctccgccaagttcacccccgacaacaagtac
gtcttgtccggctccgacgacggcaatatccgcctttggcgcgcaaacgcatccgaccgc
agcggagtcaagagcgctcgtcaacgggccaagctcgagtacgaccaggccttgatccag
agatactcgcacatgccggaaatccgcagaatccgccgccagcgtcacgtgcccaagccg
atcaagaaggcgcgcgagatcaagcgggaggagctgatggcgatcaagagacgcgaggag
aacgtgcgcaagcacaccaagaaggagaacctgcccaagagacagagcgagcgcgagaag
atgatcctggccaaggagcaataa
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