Aspergillus luchuensis: AKAW2_31332A
Help
Entry
AKAW2_31332A CDS
T08060
Symbol
SYF1
Name
(RefSeq) pre-mRNA-splicing factor syf1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AKAW2_31332A (SYF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aluc03019
]
AKAW2_31332A (SYF1)
03041 Spliceosome [BR:
aluc03041
]
AKAW2_31332A (SYF1)
Messenger RNA biogenesis [BR:
aluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
AKAW2_31332A (SYF1)
Spliceosome [BR:
aluc03041
]
Complex B
Other components
Prp19-related factors
AKAW2_31332A (SYF1)
Complex C
AKAW2_31332A (SYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
Mad3_BUB1_I
SNAP
DEP
TPR_17
ARM_TT21
ARM_TT21_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
64959338
NCBI-ProteinID:
XP_041541779
UniProt:
A0A7R8AAT0
LinkDB
All DBs
Position
3:complement(join(3984252..3984537,3984592..3986603,3986697..3986750,3986813..3986929,3986997..3987086))
Genome browser
AA seq
852 aa
AA seq
DB search
MPGTILPPRSHRQHAQMDRTSASGPDLYLIADQDTVYEQDLLRSPGSIKPWLAYIEYKQQ
HGTLYEQAFVMERACRELPRSYKLWKMYLEFRTHHLKGRNATVYRAEYQKVNALFERALI
LLNKMPRIWEMYLSFLLQQPLVTQTRRTFDRALRALPITQHNRIWKLYKTFARSASGQTA
VKIWARYMQIHPENAEEYIQLLVDMGQYTEAVKRYMEILDNPRFQSKEGKSNFQLWTEMV
DLLVSKAKQIETGPQVGIDVDAILRSGIDRFADQRGKLWAGLATYWITRGNFEKARDVFE
EGITTVMTVRDFTLIFDSYVEFEESIIGSLMESAATRTDKGQSDEEADFDLDLRMMRFEQ
LMDRRPFLVNDVLLRQNPNNVIEWEKRVALWGDNKHEVVQTYTAAIAAINPKKAHGKFSE
LWVNYAKFYENGGDLDTARVIFEKAVKVPYKSVAELAETWCEWAEMELRSENFDKAVEIM
AKATQAPKKSTVDYFDENLSPQQRVHKSWKLWSFYVDLVESVSSLEETKKVYERIFELRI
ATPQTVVNYANLLEENKYFEDSFKVYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLR
DLFEQALDGCPPKFAKPLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRFEMFEFYIT
KSASNFGLTSTRPIYERAIAALPDQEAKEMCLKFAEMERRLGEIDRARAIYGHASQFCDP
RTNAPFWQKWEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQAIARSQQRTQDGG
KDNEQDGEDAAAERADAMAALERQACAPVGFVAASTGPEGGNRPPPAGQEQQPSAAPVNP
DAIDLDDDMDAD
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgccagggacaatcctgcccccgagatcccaccggcaacacgctcagatggaccgaacg
tcggcctcagggccggacctctacctgattgccgatcaggatactgtctatgaacaggat
ctccttcgcagtcccggtagcatcaagccatggcttgcctatatcgaatataaacagcaa
catggcacgctctacgagcaagcctttgtcatggagcgtgcgtgcagagaattgccgaga
tcttacaagctgtggaaaatgtacctcgaattccggacacaccacctaaagggccgcaac
gcgactgtctatcgggccgaataccagaaagtgaacgcgctcttcgagcgtgctctcatc
ctgctcaataagatgccgcggatatgggaaatgtacctctctttcctgctccagcagcct
cttgtcacgcaaactcgacggacattcgatcgtgcactgcgagctctgccaatcacacaa
cacaatcggatttggaagctctacaagacttttgcgcgttccgcgtcaggccagaccgct
gtgaagatctgggctcggtacatgcagattcaccctgagaatgccgaggagtacatccaa
ttgctcgtcgatatgggccagtacacggaggccgtgaagcggtacatggagatcctcgac
aacccccgttttcagtccaaggaaggaaagagtaactttcagctgtggacggagatggtt
gatttgttggtatcaaaggcaaagcagatcgagactggccctcaggtaggaattgatgtt
gacgccattttgcgcagcggcattgatcggtttgccgaccagaggggcaagctgtgggct
ggcttggccacgtactggatcaccagaggcaatttcgaaaaagctagagatgtctttgag
gaaggtatcacgacggtcatgacagtcagagactttaccctgatctttgactcttatgtc
gaattcgaggagtctattatcggaagcttgatggagtcagcagcaactcgaactgacaaa
ggacaaagtgacgaagaagccgacttcgaccttgatctgcgaatgatgcgatttgagcaa
ctgatggatcgacgaccgttccttgttaacgatgtgcttctcaggcagaaccccaacaat
gtcattgagtgggagaagagagtggccctctggggagacaacaagcacgaagtcgtgcaa
acatatacagcagctattgcagctatcaaccccaagaaggcccatggcaaattctccgaa
ctctgggtcaactatgccaaattctacgagaatggaggcgacctagacacagctagggtt
atcttcgaaaaggctgttaaggttccctataaatcagtggctgaactggccgagacatgg
tgcgagtgggcggaaatggaactccggagcgagaacttcgacaaggccgtagagatcatg
gcgaaggcaacacaagcaccgaagaaatcgactgtggactatttcgacgagaacctgtca
cctcagcaacgtgtgcacaagagctggaagttgtggagtttctacgtcgacttggtagaa
agcgtgtcttccctggaggagaccaagaaggtgtacgaaaggattttcgaactgcgcatc
gctacccctcaaaccgtcgtcaactacgccaatctcctggaggagaacaaatacttcgaa
gactcctttaaggtatacgaacgtggattggatctcttcagttacccagttgcattcgag
ctgtggaatctctacctgaccaaggccgttgaccggaagattggaatcgagcgactccgc
gatctgtttgaacaggcgctggatggatgtcctcccaaatttgcaaaacccctgtacttg
atgtacggcaacctggaagaggagcgcggtctggccagacatgccatgagaatctatgag
cgtgctacccgggccgtctccgacgaggacagattcgagatgttcgagttctacatcacg
aagtcggcttcaaacttcggattaacttccacgagacccatctacgaacgggccattgca
gccttgcccgaccaagaagcgaaggaaatgtgcctcaagtttgcagaaatggagcggaga
ctcggagaaatcgaccgggcccgtgcgatctatggacacgcgtctcaattctgcgatccg
cgtaccaatgcgcccttctggcagaaatgggaggcattcgaagtccagcatggaaacgag
gacaccttcaaggagatgcttcgtatcaagcgcagtgttcaagcacagtacaacaccgac
gtcaacttcatcgcttcccaggcgattgcccgcagtcaacagcggacccaagacggcggc
aaagacaacgagcaagatggcgaggacgcggcggcggagcgtgcagacgcaatggcagca
ttggagcgacaggcttgtgcccccgtgggctttgtcgccgccagcaccggaccagaaggt
ggcaaccggccacctccagctggccaggaacagcagccttcggctgctccagtcaacccg
gatgcgattgacctcgatgacgacatggatgctgactag
DBGET
integrated database retrieval system
