KEGG   Aspergillus luchuensis: AKAW2_40394S
Entry
AKAW2_40394S      CDS       T08060                                 
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
aluc  Aspergillus luchuensis
Pathway
aluc03018  RNA degradation
aluc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aluc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AKAW2_40394S (LSM2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AKAW2_40394S (LSM2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aluc03019]
    AKAW2_40394S (LSM2)
   03041 Spliceosome [BR:aluc03041]
    AKAW2_40394S (LSM2)
Messenger RNA biogenesis [BR:aluc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     AKAW2_40394S (LSM2)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     AKAW2_40394S (LSM2)
Spliceosome [BR:aluc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    AKAW2_40394S (LSM2)
 Complex C
  U2 snRNP components
    AKAW2_40394S (LSM2)
SSDB
Motif
Pfam: LSM LRR_9 Hfq SM-ATX Gemin7
Other DBs
NCBI-GeneID: 64960033
NCBI-ProteinID: XP_041542474
UniProt: A0A146F4A5
LinkDB
Position
4:join(1080806..1080819,1080903..1081153,1081254..1081285)
AA seq 98 aa
MLFFSFFKTLTNQTVTIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM
FIRGSVVRYVMLPRSEVDIGLLEDATRREAANQAGKAR
NT seq 297 nt   +upstreamnt  +downstreamnt
atgctcttcttcagcttcttcaagactcttaccaaccaaacggtgaccatcgaactcaag
aacgacattcgcatccgcggcactctcaaatccgtcgaccagtacctgaacattaagctg
gatgatgtcgacgttctggatctggataaatacccgcatctgtcctccgtgaagaacatg
tttatccgtggtagtgtggtgcgctatgttatgttgccgaggtcggaggtcgatattggg
cttttggaggatgcgacgaggagagaggctgcgaaccaggctggcaaagctcggtga

DBGET integrated database retrieval system