Aspergillus luchuensis: AKAW2_40546A
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Entry
AKAW2_40546A CDS
T08060
Name
(RefSeq) uncharacterized protein
KO
K12618
5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03008
Ribosome biogenesis in eukaryotes
aluc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AKAW2_40546A
09123 Folding, sorting and degradation
03018 RNA degradation
AKAW2_40546A
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aluc03019
]
AKAW2_40546A
03009 Ribosome biogenesis [BR:
aluc03009
]
AKAW2_40546A
03016 Transfer RNA biogenesis [BR:
aluc03016
]
AKAW2_40546A
03036 Chromosome and associated proteins [BR:
aluc03036
]
AKAW2_40546A
Messenger RNA biogenesis [BR:
aluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
AKAW2_40546A
mRNA degradation factors
5'-3' decay
5' exonucleases
AKAW2_40546A
Ribosome biogenesis [BR:
aluc03009
]
Eukaryotic type
Pre-60S particles
RNases
AKAW2_40546A
Transfer RNA biogenesis [BR:
aluc03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
AKAW2_40546A
Chromosome and associated proteins [BR:
aluc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
AKAW2_40546A
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_N
XRN_M
XRN1_D2_D3
XRN1_D1
SH3_12
RXLR
Motif
Other DBs
NCBI-GeneID:
64960185
NCBI-ProteinID:
XP_041542626
UniProt:
A0A146FS56
LinkDB
All DBs
Position
4:complement(join(1503336..1505866,1505918..1507604))
Genome browser
AA seq
1405 aa
AA seq
DB search
MGVPKFFRWLSERYPAISMLIAENRIPEFDNLYLDMNGIIHNCTHKDSDSPTFRMTEDKM
FIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRARRFRTALDAETAKEKAIAQGI
EMPKEEAFDSNCITPGTEFMAKLTEQLKYFINKKISEDKDWQGVEIVLSGHEVPGEGEHK
IMEYIRHAKAQPLYDPNVRHCLYGLDADLIMLGLLSHDPHFSLLREEVTFGRQVQKKSKE
LEHQNFFLLHLCMVREYLELEFQELEQEGVLSFPFDMEKVIDDFILMAFFVGNDFLPNLP
NLHINEGALAFMFKIYKESLPKMGGYINEQGVIKMDRLGILLDALSDVEFRFFEHEYSDA
QWIRAKKGDVTEPQEKPKGFTITPAQKELFKQVKKYVLNRPGKAAETKPLDFASSLPARD
RKFVEQLADDLRLPWTTVADEHGDRFIRVQLPGNDNDDSDDEDEEASVAVQRIIRRYDNA
KVQELSPEEAQQAAEKKYEAKFQEWKNNYYVGKFGWGLDSHEEMRELTENYVQGLQWVLY
YYYRGIASWPWFFKYHYAPMISDVKKGLNADTNFRLGKPFRPYEQLMGVLPDRSKKTVPA
AYRDLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEERRLLDALATREHLLTPE
EKARNGFGASLKFTYSPEVQFIYPSSLPGVFPDIPNCHCIENIFDLPTMDGLEPYIGLMD
GVQMGAAALAGFPSLQTLPHVGQLGHHGVTVFQQESRNESMVITLLDPGSRSSVELAKQK
LGQRVHVGYPFLQEALVIRVSDELFDYILPEPTGHVVSIPHTPAQIDQWKRKAERIESSY
SKRLGTIIGPVESMVHVQLLKGLIKTDEGATVKEFADIPGQETDYALQLVVDDVINPDQR
FIEREALPIEEEFPENSRAFMLGEYNYGRPVQITGHDHGKVNGMIAAVKVREPEFGRDRA
RDAEKLCPYMPSYAIARSLRLNPLVLAKITSSFSVDVEGQRVNLGLNLKFEARKQKVLGY
SRRGDSGWEFSPKAVELLQQYMIKFPEFIAGIQRNPQNDRYTPTDFYPEETALLKMKEIR
DWLKSIEAKNFERVPLDAEQLDSDLVKLIEQDADQLLQSMPPMEVKAVRGLPRSALLRPS
DVEQRLGNQTFKLGDRVVYAQDSGKVPIATRGTVVGLTRTPRALLLDVVFDVSFMSGTTL
GDRCSPFRGQTVLASSVLNVSYRQLTVNTRASNSAQKQSQQTPLTVAGYGAPLGPGGQGQ
LREAPAPPPLGNSYRGAVSGMGNGRGRGRGASNGVGAQTTLPFRPQPNGASPAGGRGRGG
MNGGGRGGRGGPARTRGGYVAVDNDPEAGVLNHNPNFRPKNYSQVPPPQSISGRGRGRGN
NMRGDRGTGFRGRGRGRGAAVAGEN
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcccaagttcttccgctggctgagcgagcggtatcccgcgatctctatgttg
atcgcggagaaccgtataccggaattcgacaacctatacctggatatgaatggcattatt
cataactgtacacacaaggacagcgattcaccgacttttcgcatgaccgaggataagatg
tttatcgctatctttaactatatcgagcatttgtatggcaagatcaagcctaagaagctc
ttcttcatggcagtcgatggtgtggctccgcgagccaagatgaaccagcagcgtgctcga
cgtttccggacggctttggatgctgagacggccaaggagaaggcgattgctcagggtatc
gagatgccgaaggaggaagcttttgacagcaactgcattacacccggtaccgagtttatg
gccaagttaaccgagcaattgaaatactttatcaacaagaagatctccgaagacaaggat
tggcagggagtcgagattgtgctttctggccacgaagttccaggtgaaggtgaacacaag
atcatggagtacatccggcatgcgaaagcacagcctctctacgatcctaacgtccgtcac
tgtttgtacggccttgacgctgacctgatcatgttggggcttctgagtcacgatccccac
ttttccctgcttcgtgaagaggtcaccttcggtcgtcaagttcagaagaaatctaaggag
cttgaacaccagaacttctttcttttgcatctgtgtatggttagagaatacctggagttg
gagtttcaggagttggaacaggaaggtgttttgagctttccgtttgacatggaaaaggtt
attgacgatttcattctaatggctttctttgttggaaacgactttttgcccaacttgccc
aatctgcatattaacgagggtgctttggcattcatgtttaagatctataaggaatcattg
cccaagatgggtggctacattaacgaacaaggtgttatcaaaatggaccgactgggcatc
cttttggatgctctgagcgatgtcgagttccgcttcttcgagcacgagtactcagatgcg
cagtggattcgggccaagaagggcgatgtcacagaaccccaggagaagcccaagggcttc
acgatcactcctgcccagaaggaattattcaagcaggtcaagaagtacgttctgaaccga
cctggaaaggcagcagaaacgaagcctcttgactttgcttcttcattgccggctcgtgac
cgcaagtttgtggagcagctggcagatgaccttcggctgccgtggacgaccgtcgcagac
gaacatggtgatcggttcatccgcgtgcagctccctggaaatgataatgacgacagcgat
gatgaggatgaagaggcctccgttgcggttcagcgaattatccgaagatacgataatgca
aaggtccaggagttatcacccgaggaagcccaacaagcggcggagaagaagtatgaagcg
aagttccaggaatggaagaataattactacgtcggcaagtttggctgggggcttgatagc
catgaggagatgagggagttgacggagaactatgtacagggtctccagtgggtcctgtac
tactactacagaggcattgcatcctggccgtggttcttcaagtatcactacgcaccgatg
atctccgacgtaaagaaaggcctcaatgcagataccaacttccgacttggcaagcccttc
cggccgtatgagcagctgatgggtgtgttgcctgaccgaagcaagaagactgttcctgcg
gcataccgggatctaatgacttctccggattccccaatcatcgatttttacccacgtgat
tttgaactggatatgaatggaaagaagatggaatgggaggcagttgtcaagattcctttt
attgaagaacgtcgcctgctggatgccctcgcaactagggaacacctgctgaccccggag
gagaaagcacggaatggattcggtgccagtcttaagttcacttactctccggaggtgcag
ttcatctacccgtcctctcttcccggcgtgttcccagacattccgaactgccactgcatc
gagaacattttcgacttgccgaccatggatggacttgagccgtacattggattgatggat
ggcgtgcaaatgggggctgcagcgttggctggcttccctagtctgcagacgctgccccat
gttggccaactgggccaccacggtgtcactgttttccagcaggaaagtcgcaatgagagc
atggtcattacattgctcgatcctgggagcaggtcgagcgtcgagttggccaaacagaaa
cttgggcagcgcgtccatgtgggttacccgttcttgcaagaagcgctcgtaatccgtgta
tcagatgaactattcgattatattctaccggaacctacgggacatgttgtttctatcccc
catacccctgctcagattgatcaatggaaaagaaaggccgagcggatcgagtcgtcttac
agcaagagacttggtaccattatcggcccggtcgagtcgatggtgcatgttcagctgctc
aagggtttgatcaagaccgatgagggcgctacggtcaaggaattcgccgatattcccggg
caagaaaccgactacgctctccagctggtcgttgacgatgtgatcaaccccgatcaacga
ttcattgaacgggaggccctacccatcgaagaggagttccccgaaaactcccgggcgttc
atgcttggagaatacaactatggacggcccgttcagattacgggtcatgatcatggcaag
gtgaatggaatgattgcagcggtgaaggttcgggaaccggagtttggaagagaccgagcc
cgggatgctgagaagctctgtccttacatgccgtcgtacgctattgctcgtagcttgcgg
cttaatcctttggttctagccaagatcacctcgtcgttttccgttgacgtcgaagggcag
cgtgtcaatctgggtctcaatttgaagttcgaggcccggaagcaaaaggttcttggctat
tctcgccgtggagactctggttgggaattcagccctaaggccgtagagctcctgcaacag
tatatgatcaaattccccgagtttatcgcgggcattcagcgcaatccgcagaatgatcgg
tacactcctacggacttctatcccgaagagaccgccctcttgaagatgaaggaaattcga
gactggttgaagtcaattgaggcgaagaacttcgagcgtgtccctctggatgcggaacag
cttgattctgacctcgtcaagttgatcgaacaagatgccgaccagctgctccagagcatg
ccacccatggaagtgaaggcggtccgtggcctgccccgcagcgccctgctgcggccgtcc
gacgtcgagcagcgacttggaaaccagacgttcaagttgggagatcgggtcgtgtatgct
caagattccggcaaggtccccatcgccactcgaggcaccgttgtcggccttacccggaca
ccacgtgcccttctccttgatgtggtctttgacgtctcgttcatgagcggtaccacgctc
ggcgaccgctgctctccgttccgaggccagacggttctggcgtcttcggtgctgaacgtc
tcctaccggcagctgaccgtcaacacgcgtgcgtcaaacagcgcgcaaaagcagtctcag
caaacgcccttgactgttgccggatatggtgctccgcttgggcccggtgggcagggacag
ctgagagaagccccggccccaccgcccttgggtaattcctaccgcggcgcagtctccggc
atgggtaatggtcgcggacgtggacgtggtgcctccaatggcgtaggtgctcaaaccacg
ttgccgttccggcctcagcccaacggagcatcgccagccggtggtcgaggccgaggaggc
atgaatggaggcggccgtggtgggcgtggaggaccggcacgcacgcgaggcggatatgtc
gccgtggacaacgacccggaagccggggtgctcaaccataatccgaacttccggcccaag
aactattcgcaagtgccaccaccgcagagcatctctggacgaggccgtggtcgtggtaac
aacatgcgaggagacaggggaactggattccggggacgcggtcgcggtcgcggagcggcg
gttgccggagagaattag
DBGET
integrated database retrieval system
