Aspergillus luchuensis: AKAW2_40737A
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Entry
AKAW2_40737A CDS
T08060
Symbol
TFB2
Name
(RefSeq) RNA polymerase II transcription factor B 52 kDa subunit
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03022
Basal transcription factors
aluc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AKAW2_40737A (TFB2)
09124 Replication and repair
03420 Nucleotide excision repair
AKAW2_40737A (TFB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aluc03021
]
AKAW2_40737A (TFB2)
03400 DNA repair and recombination proteins [BR:
aluc03400
]
AKAW2_40737A (TFB2)
Transcription machinery [BR:
aluc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AKAW2_40737A (TFB2)
DNA repair and recombination proteins [BR:
aluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AKAW2_40737A (TFB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
64960376
NCBI-ProteinID:
XP_041542817
LinkDB
All DBs
Position
4:complement(join(2138044..2139265,2139333..2139420,2139479..2139605))
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AA seq
478 aa
AA seq
DB search
MAAAPSSRPFEYLESLAGTVFYKLYQQPSTALAIFRRMLPDLAKCFVMALLYLKDPLPAA
DLEAWVKSESLKERDNALSILGRLHILSNTVTADNVRAYKVTDPFATSLRHALTGADQTQ
SFGVLSHVPAGSEVSISDLDEYARRQWEGVLGYMVGTGGMGAPQVTLSKGVKELLQAGHL
VEIRDRRVEITQDGFAFVLQDVSTQVWHILILYVESASAIKMDSVEVLSFVFLLSSLELG
KSYEKNHLSSKQLRMLTDLADFGIVYQESPDAPRFYPTRLATTLTSDSSALSNPLLGSLS
GPAGEASSKAGTGFIIIETNYRVYAYTSSPLQISLIALFTTLKYRFPNLITGKITRQSVR
RAVEMGITADQIISYLSTHAHPQMRKHNVSRSTSNQAGIPPSVLPPTVVDQIRLWQLERD
RVKATSGFLFKDFVSLAEYEAPCRYAEEIGVLAWKSDRKRMFFVTRHEQVAAFLRSRK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcaccatcttctcgtccctttgaatacctcgaaagccttgctggcaccgtc
ttttacaaactttaccaacagccatcgacggctctcgccattttcaggcgcatgctgcct
gatctggcaaaatgctttgtcatggcacttctctacctgaaggatccgctccccgcggcg
gatctggaggcttgggttaaatcagaaagcttgaaagaacgcgacaatgcgctctccatc
ctagggagactgcatatcctctccaacactgtcacagcggataacgtccgcgcctacaaa
gtcaccgacccgttcgccacctcattgcgacatgccctcaccggcgccgaccagacacaa
tcctttggcgtcctctcacacgtgcctgcgggctcagaagtctcaatatccgatctcgat
gaatatgcgcgacgacagtgggaaggagtgctgggatacatggtcggtaccggaggcatg
ggagctccccaagtgaccctcagcaaaggcgtgaaggagctcctgcaggcgggtcatctg
gttgagatccgagatcgtcgtgtcgaaatcacccaggatgggttcgcctttgtcctgcaa
gacgtcagcacgcaggtgtggcacatattgattctctatgtcgagagcgccagcgccatc
aagatggacagtgtcgaggtcctctcgttcgtgttccttctcagcagtctcgaactcgga
aaatcatacgaaaagaaccacctcagttcgaaacaactgcgcatgctcaccgaccttgcc
gacttcggtatcgtctatcaagaatcgcccgatgcaccgcgtttctaccccacccgcctt
gcaacgacgctcacatccgactccagcgccttgagcaacccgctcttgggctctctctcc
ggtcctgccggcgaagcctccagcaaagcgggcacgggcttcattatcatcgaaaccaac
taccgtgtatacgcatatacctcatcccccctacagatctccctcattgctctgttcact
accctaaaataccgcttccccaacctcatcaccggcaaaatcacccgccagtccgtccgc
cgggccgtcgagatgggcatcaccgctgaccaaatcatctcctatctttctactcacgcc
catccgcaaatgcgcaagcacaatgtctcccgctcgacgtcgaaccaagccggaattccc
ccatcagtcctcccgcccaccgtggtggaccagattcgtctctggcagctggagcgggac
cgtgtcaaggctacctccggattcttgttcaaggactttgtcagtctggcagaatacgag
gccccatgccgctatgcagaggagattggtgttctggcatggaagtcggatcgcaagcgc
atgttctttgtaacgaggcatgaacaagtagctgcgttcctgaggagccgcaaataa
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