Aspergillus luchuensis: AKAW2_41145A
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Entry
AKAW2_41145A CDS
T08060
Symbol
CSL4
Name
(RefSeq) exosome 3'->5 exonuclease subunit ski4 (Csl4)
KO
K07573
exosome complex component CSL4
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKAW2_41145A (CSL4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aluc03019
]
AKAW2_41145A (CSL4)
Messenger RNA biogenesis [BR:
aluc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AKAW2_41145A (CSL4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
AKAW2_41145A (CSL4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
IFTAP
Motif
Other DBs
NCBI-GeneID:
64960784
NCBI-ProteinID:
XP_041543225
UniProt:
A0A146EZ33
LinkDB
All DBs
Position
4:complement(3249498..3250253)
Genome browser
AA seq
251 aa
AA seq
DB search
MATALPTLAIPGQRLGSIASYAAGPGTHVQNATIYASIAGPVVVDQAQPSSKAKLILSVS
RTGPKKAAAPPPSTKASAKPATTGKPKLRYNTLPAVDSVVLARVTRVQKRQATVSILVVL
DESASSQPLNPAQTASDNDNIEAILSSAANPENHSNSDELRFQALIRKEDVRAVEKDRVV
MDEMFRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSESGNMMFPVSWKEMRDPVTG
VAELRKVARPF
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcactacccactctggccatcccaggccagcgcctgggctcaattgcctca
tatgccgccggtcctggtacacacgtgcagaacgcaaccatctatgcctccatcgcaggc
cctgtggtcgttgatcaagcgcaacccagctccaaagcaaagctcatcctgagtgtctcc
cgcacaggccccaagaaggcagctgctcccccacccagcaccaaggcgtccgccaaacca
gccaccactggaaagcccaaactgagatacaacaccctccccgccgtcgactcggtcgtg
ttggcgcgcgttacccgcgttcagaagcgacaagccaccgtgtctattctagttgtgctc
gacgaatctgctagctctcagcctctcaaccccgcacagactgcatcggacaatgacaat
attgaagctatcctctcgtccgcggctaatccagagaaccacagcaactcggatgaactt
cgcttccaggcgctgatccgcaaggaggatgtgcgcgctgttgagaaagaccgcgtcgtc
atggatgagatgttccgtgttggggatattgttcgtggaacggtcatctccctcggtgac
cagagcttctactatcttaccaccgcacgcaatgatctgggtgtcgttatggcccgcagt
gagtcgggtaatatgatgttccctgttagctggaaggaaatgagagatcctgttactggg
gttgcggagttgaggaaggttgctaggccgttttga
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