Aspergillus luchuensis: AKAW2_41165A
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Entry
AKAW2_41165A CDS
T08060
Name
(RefSeq) uncharacterized protein
KO
K12881
THO complex subunit 4
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03013
Nucleocytoplasmic transport
aluc03015
mRNA surveillance pathway
aluc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AKAW2_41165A
09122 Translation
03013 Nucleocytoplasmic transport
AKAW2_41165A
03015 mRNA surveillance pathway
AKAW2_41165A
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aluc03019
]
AKAW2_41165A
03041 Spliceosome [BR:
aluc03041
]
AKAW2_41165A
Messenger RNA biogenesis [BR:
aluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AKAW2_41165A
TREX complex
AKAW2_41165A
Spliceosome [BR:
aluc03041
]
Complex C
Other components
EJC/TREX
AKAW2_41165A
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AKAW2_41165A
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
RRM_PARP14_3
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
64960804
NCBI-ProteinID:
XP_041543245
UniProt:
A0A7R8A069
LinkDB
All DBs
Position
4:complement(join(3307662..3307664,3307717..3307984,3308041..3308111,3308167..3308331,3309356..3309385,3309436..3309651))
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AA seq
250 aa
AA seq
DB search
MSAKLDKSLDEILVSRRQGARRRARRSAPKAANTSVPVGGVKKTTKAAKAPGKAVQNGHP
VSTESKIMVSGLPSDVNEANIKEYFTKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAA
KAAKDLNGLLVDGRPMKIEVVVDASHAPEVPAPKPLGERVAQTKPQPKPATATKAAAGAK
GRKGRARRPNGRGNRPKPKTVEELDAEMVDYFSTTNENAGPAEGNAQANGAAPQQPAANG
GEDLGMAEIS
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaagttggacaagtctctcgatgagatcctcgtcagccgtcgccagggcgcc
cgccgtcgcgctcgtcgctcggctcccaaggctgccaacacttctgtcccggtcggaggt
gtgaagaagaccaccaaggctgccaaggcgcccggaaaggctgtccagaatggacacccg
gtctctacggaaagcaagatcatggtcagcggcttgccttccgatgtgaacgaggccaat
atcaaggaatatttcacaaagtccgcaggtcctgtcaagcgagttatgctcacttacaac
caaaacggcacgagccgtggtatcgcctcgatcgtgttcagcaagcccgacacagctgcc
aaggctgctaaggacttgaatggactactcgttgatggcagacccatgaagatcgaggtc
gtcgtcgacgcctcccacgctcctgaggtccccgcccccaagcctctgggcgagcgcgtt
gcgcaaaccaaaccccaaccgaagcccgctaccgctaccaaggctgctgctggtgccaag
ggccgcaagggccgcgctcgtcgccctaacggccgtggcaaccgccctaagcccaagact
gtggaggagcttgatgctgagatggttgactacttctccaccaccaacgagaatgctggc
cctgcggagggcaatgcccaagcaaacggtgctgctccccagcagcctgccgctaacggc
ggcgaagacctcggaatggcggagatctcctaa
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