Aspergillus luchuensis: AKAW2_51188S
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Entry
AKAW2_51188S CDS
T08060
Symbol
MTR4
Name
(RefSeq) ATP-dependent RNA helicase mtr4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKAW2_51188S (MTR4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aluc03019
]
AKAW2_51188S (MTR4)
03041 Spliceosome [BR:
aluc03041
]
AKAW2_51188S (MTR4)
03009 Ribosome biogenesis [BR:
aluc03009
]
AKAW2_51188S (MTR4)
03016 Transfer RNA biogenesis [BR:
aluc03016
]
AKAW2_51188S (MTR4)
Enzymes [BR:
aluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AKAW2_51188S (MTR4)
Messenger RNA biogenesis [BR:
aluc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
AKAW2_51188S (MTR4)
Spliceosome [BR:
aluc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
AKAW2_51188S (MTR4)
Complex C
U4/U6.U5 tri-SnRNP related factors
AKAW2_51188S (MTR4)
Ribosome biogenesis [BR:
aluc03009
]
Eukaryotic type
Pre-60S particles
Helicases
AKAW2_51188S (MTR4)
Transfer RNA biogenesis [BR:
aluc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
AKAW2_51188S (MTR4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
ResIII
Helicase_C
DEXQc_Suv3
nSTAND3
ATPase_2
AAA_22
APG6_N
Motif
Other DBs
NCBI-GeneID:
64962168
NCBI-ProteinID:
XP_041544609
LinkDB
All DBs
Position
5:join(3689866..3690724,3690778..3691839,3691892..3692487,3692544..3693109,3693198..3693378)
Genome browser
AA seq
1087 aa
AA seq
DB search
MDELFDVFEDQPQAVRPADGAPKRAKKDKSKKRQVNGDVKEDGAATENPTETPEDIEITD
APAVEEEVEEAKEDEESPAADNNEQPDAKRPRLEKEPEPVVADSFETEQEREVAGSAGFQ
GVNDSTSVKLSHQVRHQVAIPPKYPYVPISEHKPPETPARVWPFTLDPFQQVAIASIQRE
ESVLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFAEEFGDAGLMTG
DVTINPTATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDAIRGVVWEETIILLP
DKVRYVFLSATIPNAMQFAEWVTKMHNQPCHVVYTDFRPTPLQHYFFPNGSEGMHLVVDE
KGVFREENFQKAMSSIADKRGDDPSDAMAKRKGKGKDKRLNKGGTQEKSDIFKIVKMVML
KNLNPVIVFSFSKRECESCALQMKNLAFNDDSEKEMVQKVFDSAIEMLSEEDRGLPQIQN
ILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVVFTSVRK
FDGFSQRWVTPSEFIQMSGRAGRRGLDDRGIVIMMVGEEMDPAVAKEIVRGEQDRLNSAF
HLGYNMILNLMRVEGISPEFMLEKCFYQFQNTAGVAELEKQLTEMEEKRANLNIPDEGTI
REYYDLRKQLRKFGDDVQAVMSHPEHCLSYMTPGRLVQIKHKDMEFGWGIVVNWKHRKPP
KNATEEYNDHQKHVVDVLLNIADGDSVGTKSFEDLPAGVRPPKEDEKSRMEVVPVVLSCI
QSIAHVCLRLPKDLKPNDTRNNLKNTLEEVKKRFPDGIATLDPIENMGIKDDEFKKTLRK
IEVLESRLLSNPLHESPRLPELYNQYSEKVDLGNKIKETKKKISEAMAIMQLEELKCRKR
VLRRFGFINEAEVVQLKARVACEISTGDELMLSELLFNGFFNNLTPEQVASALSVFVFEE
KTKETPALTRDDLAKPLREIQAQARIVAKVSQESKLAVNEEEYVQGFHWELMEVIFEWAN
GKSFADICKMTDVYEGSLIRVFRRLEECLRQMAQAAKVMGSEDLEGKFETALTKVRRDIV
AAQSLYL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcttttcgacgtcttcgaggaccagcctcaggccgttaggcctgcggacgga
gctcccaaacgagcgaagaaagacaagagcaagaagcgacaggtcaatggcgacgtgaag
gaggacggtgctgctacggaaaaccctacggaaacccctgaggatattgagatcacagat
gcgcctgccgtcgaagaagaagtcgaagaagcgaaggaggacgaagaaagccccgccgcc
gacaacaatgaacaaccggatgcgaaacgcccgcgcctcgagaaggaaccggagcctgtg
gtagcggactcattcgagacggagcaggagcgcgaagtcgcgggatcggcaggctttcaa
ggcgtcaacgattctacctctgtcaagttgtcccaccaggtgcggcatcaggtcgccatc
ccgccgaagtacccatacgtgcccatttccgaacacaagccgccggagaccccagccaga
gtgtggccattcactttggatcctttccagcaagtcgcgattgcatcgatccagagagaa
gaaagtgtcttggtttccgctcatactagtgccggaaaaaccgtggtcgccgagtacgcc
attgcgcaatgtttgaagaacaatcagagagtcatctatacgagtccgatcaaggctttg
agtaaccagaagtaccgagagtttgccgaggaatttggagatgcgggcttgatgactgga
gatgttaccatcaacccaacagccacttgcctggtcatgaccactgagattttgcggtcc
atgctctaccggggttctgagattatgcgcgaagttgcctgggtcattttcgatgaaatc
cactatatgcgtgatgcgatcagaggtgttgtctgggaggaaaccattatcttgttgccc
gacaaggttcgatatgtattcttgtctgccaccatcccaaacgctatgcaattcgccgaa
tgggtaacgaagatgcacaaccaaccctgccacgtcgtctataccgatttccggccgacg
ccactacaacactacttcttccccaatggatcggaaggtatgcatcttgttgtggatgag
aagggagtattccgtgaggagaatttccagaaggccatgagcagtatcgccgacaagagg
ggcgacgacccgtcagatgcgatggccaagcggaaaggaaagggcaaggacaagagattg
aacaagggtggcacccaggaaaagagcgatattttcaagattgtgaagatggtcatgctc
aagaacctgaaccctgtcattgtcttcagtttcagcaagcgcgaatgtgagagctgtgct
ctgcaaatgaagaacttagccttcaacgacgattctgagaaagagatggttcagaaggtc
tttgacagcgcgatcgaaatgttgtccgaggaggacaggggattgccccagatccagaat
atcttgcctcttcttcgcaggggtattggcgtccatcactctggtctgctccctatcctc
aaggaaacgattgagattcttttccaggaaggtctgatcaaggtactcttcgccactgag
acgttctccattggtcttaacatgcctgcgagaactgtcgtcttcacaagcgttcggaaa
ttcgacggcttcagccagcgttgggtcacaccttcagagtttatccagatgtctggccgt
gctggtcgaagaggtcttgatgatcgcggtatcgttatcatgatggtcggtgaggagatg
gaccccgccgtggcgaaggaaattgttcgtggtgaacaggatcgacttaattcggctttc
cacttgggttacaacatgattcttaacctcatgcgtgtagaaggcatctcacctgagttc
atgttggagaagtgtttctaccaattccagaacaccgccggtgtcgcagagcttgagaaa
caacttacggagatggaggagaagcgtgccaatctcaacattcccgacgaaggaaccatc
cgcgagtactacgatctgcgtaaacagctccgcaaattcggcgatgatgtccaagcagtg
atgagccatcccgagcattgcctgtcatacatgacgcccgggcgtttggttcaaattaag
cacaaggacatggaatttgggtggggtatcgttgtcaattggaagcatcgcaagccaccg
aagaatgcgactgaagagtacaacgatcatcagaaacatgttgttgatgtgctcctcaac
attgccgacggagattccgtgggcaccaaatcattcgaggacctaccagctggcgtcaga
ccacccaaggaggatgaaaaatcccgcatggaggtcgtgccagtcgttctcagctgtatc
cagagcattgcgcatgtctgcctccgtcttcccaaagacttgaagccaaatgacacacgg
aacaacctgaagaacaccctggaggaagtgaagaagcgcttcccggatggcattgccact
cttgatcctattgagaacatgggtatcaaggatgacgagttcaaaaagacgctcaggaaa
atcgaggttctggagtcccgtcttctctccaatcccctgcacgagtcgccacgtttaccc
gaactatacaatcagtactccgagaaggtggatttgggaaacaagatcaaggagaccaag
aagaagatctcggaggctatggcaatcatgcaactcgaagaattgaaatgccgtaagcgt
gtgcttcgtcgattcggatttatcaatgaggccgaagttgtacaactgaaggcgcgcgtt
gcctgtgaaattagtacaggtgacgagttgatgctcagtgaacttctcttcaacggtttc
ttcaataaccttacgccagagcaagtggcatctgccctgagcgtcttcgtctttgaagag
aagaccaaggagacccctgctctgacacgggatgacctcgcgaagcccctcagggagatc
caagcgcaggctcggatcgtcgccaaggtctcccaggagtccaagttggcggtcaacgag
gaggaatacgtgcaaggtttccactgggagttgatggaggtcatcttcgaatgggcgaac
ggcaagtcttttgctgacatctgcaaaatgaccgacgtctacgaaggcagtttgattcgc
gtcttccgccgattggaagagtgtctccgacagatggcgcaggcagccaaggtcatggga
agcgaagatttggagggtaaattcgagacagccttgaccaaggtgcgcagggacattgtc
gctgcccagtccttgtatctctaa
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integrated database retrieval system
