Aspergillus luchuensis: AKAW2_51469A
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Entry
AKAW2_51469A CDS
T08060
Symbol
TFB1
Name
(RefSeq) RNA polymerase II transcription factor B subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03022
Basal transcription factors
aluc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AKAW2_51469A (TFB1)
09124 Replication and repair
03420 Nucleotide excision repair
AKAW2_51469A (TFB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aluc03021
]
AKAW2_51469A (TFB1)
03400 DNA repair and recombination proteins [BR:
aluc03400
]
AKAW2_51469A (TFB1)
Transcription machinery [BR:
aluc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AKAW2_51469A (TFB1)
DNA repair and recombination proteins [BR:
aluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AKAW2_51469A (TFB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Rx_N
PIN_8
DUF5357
Motif
Other DBs
NCBI-GeneID:
64962449
NCBI-ProteinID:
XP_041544890
UniProt:
A0A7R8ABK7
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All DBs
Position
5:complement(join(4475929..4477670,4477728..4477875))
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AA seq
629 aa
AA seq
DB search
MTMAPPSGSAAYKKKDGTLTIAQDRQSISWIPAAGGAAGAITLPVAQITNLQQTPASNPK
VMLKIFVLPPNAPASSPEQYVFSFTAGANARPEADAIRDALSAAIQAAKTAQSAPVKEGV
SPAMAIANAVSSAGKEKSPWDDDKRLQGDVELQQSLLKSNSTLQRMFMESLHTKPDTLSA
SQFMTQFWSTRLHLLRAHAIERSQTRGSYNVLSTLKPRVEDSVTKLNISKEQIQLIFNQH
PLVKRVYDENVPKLSEQQFWSRFFQSRLFKKLRGERISETDPTDIILDKYLKADESGNLP
RDAHVPHFLDLAGNEVNNSQRQGNRPDLDMRPSSVEKVPIIRTLNSLSEKIMANVAPADG
EADGKTGEDGTYNELQLRDLRGDEEQQRILLNVKDQSRFFSSHSKSAEDEQNKLFAQQDP
NQILGKLRGDLEENLPEGGAAPLGRLVEPQEDDDEDQQKFEDVIGSRVNLKRASNQILEA
IRDRRSQTEGSGNAGTYGLSTALYDRLTLTHATTTEFLHQFWQAFLSGNPDRAGEVASLV
ESLNRAMERIKSVAQDAEAERQVEVDRLKQHAREVLERTGRKLKLNLAGVAGGEQAVNRL
LGPTNRALETALAKYNQALAEEMKEMPSA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggcacctccgagcgggtcggcggcatacaagaagaaagatggcaccctgacc
atagcccaggaccgccagtcgatctcttggatcccggcggctggcggtgcagctggtgca
attactcttcctgttgctcagattaccaatttgcaacagacccccgccagtaacccgaaa
gtgatgctgaagatctttgtcctccctccgaacgcccccgccagctcacccgaacaatat
gtcttttccttcacagctggagcgaacgcgcgaccggaagctgatgccatcagagatgcg
ctcagtgccgctatccaagctgcaaagacagctcagagtgcacccgttaaagaaggcgtt
tctcctgctatggccattgcgaatgcggtttcatcggcagggaaagagaagagcccgtgg
gatgatgacaaacggcttcaaggagatgtggagctgcagcagtcgctgctgaaatcgaat
tcgactctgcagcgcatgttcatggagtcattacacaccaagccggatacgctgtctgct
tcacaattcatgacgcagttctggtctactcgacttcatcttttgcgcgcacatgcgatc
gaacggtcgcagacacgcggatcgtacaatgtgctgtcgacattgaagccgcgggtggag
gatagcgtgacaaagctgaatattagcaaggagcagatccagttgatttttaatcagcac
ccgcttgtgaagcgggtatacgacgagaatgtacccaagcttagcgagcagcaattctgg
tctcggtttttccagagtcggctgtttaagaaactgcgcggtgagcgcatctctgaaacg
gatcccacggacataatcctggataaatacctcaaggcggatgagtcgggaaatttaccg
cgcgatgcgcatgttccacatttcctagatttggctggaaatgaagtgaacaacagtcaa
cggcaaggcaaccgacccgatctcgacatgcgcccgtcctctgtggaaaaggtgcccatt
atccgcacactgaacagtctgagtgagaagattatggcgaacgttgcaccagccgatggc
gaggcggatggcaagacgggtgaggatgggacatacaacgagctgcagctgcgcgattta
cgcggggacgaggaacagcaacgtattctcctcaacgtgaaggaccagagtcgctttttc
tcgtcgcattcgaaatctgcggaggatgagcaaaacaagctatttgcccagcaggatccg
aatcagatactcggaaagctacggggagatctagaagaaaatttgccagagggcggagcc
gcgccgctggggagactggtagaaccgcaggaggatgacgacgaggatcaacaaaagttc
gaagacgtgattggttctagggtgaatttgaagcgcgcctcaaaccaaattctcgaagcg
atccgtgaccgccgatcccaaacagagggatcaggcaatgccggcacgtacggtttgtcg
actgcgttgtacgaccggttgacgctgacgcatgccacgacgactgaattcttgcatcaa
ttctggcaggcattcctatctgggaatccggatcgcgcgggtgaggtagcttcgctcgtg
gagtccctaaacagagccatggagcgcataaaatcagtggcgcaagacgcagaggcagag
cggcaagttgaggttgatcgactgaagcagcatgcccgggaagtgctggaaaggacagga
aggaagctcaagctcaatctcgctggtgtggctggaggtgaacaggctgtcaatcgacta
ctggggccgaccaatcgggcgttggaaacggcgctggcaaagtacaaccaggcgttggct
gaagaaatgaaggaaatgccatctgcgtga
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